Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.66■□□□□ 0.58
Sfr1Q8BP27 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sfr1Q8BP27 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sfr1Q8BP27 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sfr1Q8BP27 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sfr1Q8BP27 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sfr1Q8BP27 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sfr1Q8BP27 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sfr1Q8BP27 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.65■□□□□ 0.58
Sfr1Q8BP27 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sfr1Q8BP27 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sfr1Q8BP27 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sfr1Q8BP27 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sfr1Q8BP27 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sfr1Q8BP27 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sfr1Q8BP27 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Gm13148-201ENSMUST00000118892 745 ntBASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sfr1Q8BP27 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sfr1Q8BP27 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sfr1Q8BP27 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sfr1Q8BP27 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sfr1Q8BP27 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sfr1Q8BP27 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sfr1Q8BP27 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sfr1Q8BP27 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Sfr1Q8BP27 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sfr1Q8BP27 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.61■□□□□ 0.57
Sfr1Q8BP27 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 BC021767-201ENSMUST00000126387 1716 ntBASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.6■□□□□ 0.57
Sfr1Q8BP27 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sfr1Q8BP27 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Sfr1Q8BP27 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms