Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn3Q8BHH8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 AV356131-201ENSMUST00000206201 750 ntBASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn3Q8BHH8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn3Q8BHH8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn3Q8BHH8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn3Q8BHH8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn3Q8BHH8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn3Q8BHH8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Clrn3Q8BHH8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Clrn3Q8BHH8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn3Q8BHH8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn3Q8BHH8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn3Q8BHH8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Clrn3Q8BHH8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn3Q8BHH8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Gm7514-201ENSMUST00000209475 934 ntBASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Clrn3Q8BHH8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Gm10849-201ENSMUST00000100397 618 ntBASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Clrn3Q8BHH8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clrn3Q8BHH8 BC021767-201ENSMUST00000126387 1716 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms