Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.61■□□□□ 0.41
Sdc3Q64519 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.61■□□□□ 0.41
Sdc3Q64519 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Sdc3Q64519 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc3Q64519 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc3Q64519 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc3Q64519 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc3Q64519 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc3Q64519 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.61■□□□□ 0.41
Sdc3Q64519 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc3Q64519 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc3Q64519 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sdc3Q64519 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc3Q64519 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc3Q64519 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.61■□□□□ 0.41
Sdc3Q64519 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc3Q64519 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Sdc3Q64519 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.6■□□□□ 0.41
Sdc3Q64519 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc3Q64519 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc3Q64519 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc3Q64519 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.6■□□□□ 0.41
Sdc3Q64519 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc3Q64519 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sdc3Q64519 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sdc3Q64519 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.59■□□□□ 0.41
Sdc3Q64519 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sdc3Q64519 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sdc3Q64519 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sdc3Q64519 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc3Q64519 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc3Q64519 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Sdc3Q64519 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc3Q64519 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc3Q64519 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc3Q64519 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc3Q64519 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc3Q64519 Gm12527-201ENSMUST00000117967 564 ntBASIC17.58■□□□□ 0.4
Sdc3Q64519 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc3Q64519 Gm26524-201ENSMUST00000192339 390 ntBASIC17.58■□□□□ 0.4
Sdc3Q64519 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.58■□□□□ 0.4
Sdc3Q64519 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc3Q64519 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc3Q64519 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.58■□□□□ 0.4
Sdc3Q64519 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc3Q64519 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sdc3Q64519 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc3Q64519 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sdc3Q64519 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc3Q64519 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.58■□□□□ 0.4
Sdc3Q64519 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc3Q64519 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc3Q64519 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sdc3Q64519 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc3Q64519 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.57■□□□□ 0.4
Sdc3Q64519 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc3Q64519 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc3Q64519 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.57■□□□□ 0.4
Sdc3Q64519 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sdc3Q64519 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc3Q64519 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc3Q64519 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sdc3Q64519 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc3Q64519 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.57■□□□□ 0.4
Sdc3Q64519 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc3Q64519 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc3Q64519 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.56■□□□□ 0.4
Sdc3Q64519 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc3Q64519 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc3Q64519 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Sdc3Q64519 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc3Q64519 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.56■□□□□ 0.4
Sdc3Q64519 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.56■□□□□ 0.4
Sdc3Q64519 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc3Q64519 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.56■□□□□ 0.4
Sdc3Q64519 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sdc3Q64519 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc3Q64519 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc3Q64519 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sdc3Q64519 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Sdc3Q64519 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.56■□□□□ 0.4
Sdc3Q64519 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc3Q64519 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc3Q64519 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc3Q64519 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc3Q64519 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.55■□□□□ 0.4
Sdc3Q64519 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms