Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-3Q5R1C3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-3Q5R1C3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav3-3Q5R1C3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav3-3Q5R1C3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-3Q5R1C3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-3Q5R1C3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.79□□□□□ -0.2
Trav3-3Q5R1C3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-3Q5R1C3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-3Q5R1C3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-3Q5R1C3 Dancr-204ENSMUST00000132389 2347 ntBASIC13.79□□□□□ -0.2
Trav3-3Q5R1C3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav3-3Q5R1C3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trav3-3Q5R1C3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.77□□□□□ -0.2
Trav3-3Q5R1C3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav3-3Q5R1C3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav3-3Q5R1C3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav3-3Q5R1C3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms