Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Rps24-207ENSMUST00000224568 714 ntBASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trdv2-2Q5R1A4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trdv2-2Q5R1A4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trdv2-2Q5R1A4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trdv2-2Q5R1A4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trdv2-2Q5R1A4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trdv2-2Q5R1A4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trdv2-2Q5R1A4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Gm45102-201ENSMUST00000207427 857 ntBASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trdv2-2Q5R1A4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Trdv2-2Q5R1A4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms