Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.96■□□□□ 0.63
Trim80Q3V061 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim80Q3V061 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim80Q3V061 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim80Q3V061 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.96■□□□□ 0.63
Trim80Q3V061 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim80Q3V061 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim80Q3V061 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim80Q3V061 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim80Q3V061 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.95■□□□□ 0.62
Trim80Q3V061 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.95■□□□□ 0.62
Trim80Q3V061 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim80Q3V061 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim80Q3V061 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim80Q3V061 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim80Q3V061 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim80Q3V061 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim80Q3V061 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim80Q3V061 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.95■□□□□ 0.62
Trim80Q3V061 Gm27405-201ENSMUST00000184201 112 ntBASIC18.95■□□□□ 0.62
Trim80Q3V061 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim80Q3V061 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.95■□□□□ 0.62
Trim80Q3V061 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim80Q3V061 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim80Q3V061 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim80Q3V061 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim80Q3V061 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim80Q3V061 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim80Q3V061 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim80Q3V061 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim80Q3V061 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim80Q3V061 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim80Q3V061 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim80Q3V061 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim80Q3V061 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim80Q3V061 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim80Q3V061 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim80Q3V061 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.94■□□□□ 0.62
Trim80Q3V061 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.94■□□□□ 0.62
Trim80Q3V061 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim80Q3V061 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim80Q3V061 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim80Q3V061 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim80Q3V061 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim80Q3V061 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim80Q3V061 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim80Q3V061 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim80Q3V061 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim80Q3V061 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.93■□□□□ 0.62
Trim80Q3V061 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.93■□□□□ 0.62
Trim80Q3V061 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim80Q3V061 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.93■□□□□ 0.62
Trim80Q3V061 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim80Q3V061 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim80Q3V061 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim80Q3V061 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim80Q3V061 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim80Q3V061 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim80Q3V061 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim80Q3V061 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim80Q3V061 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim80Q3V061 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim80Q3V061 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.92■□□□□ 0.62
Trim80Q3V061 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
Trim80Q3V061 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim80Q3V061 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Trim80Q3V061 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim80Q3V061 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim80Q3V061 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim80Q3V061 Fst-202ENSMUST00000223640 2612 ntBASIC18.91■□□□□ 0.62
Trim80Q3V061 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim80Q3V061 Gm42569-201ENSMUST00000200539 472 ntBASIC18.91■□□□□ 0.62
Trim80Q3V061 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim80Q3V061 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trim80Q3V061 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim80Q3V061 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.91■□□□□ 0.62
Trim80Q3V061 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim80Q3V061 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim80Q3V061 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim80Q3V061 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim80Q3V061 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim80Q3V061 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.9■□□□□ 0.62
Trim80Q3V061 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim80Q3V061 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim80Q3V061 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms