Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
HMGXB3Q12766 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
HMGXB3Q12766 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
HMGXB3Q12766 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC37.51■■■■□ 3.6
HMGXB3Q12766 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC37.51■■■■□ 3.6
HMGXB3Q12766 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC37.51■■■■□ 3.6
HMGXB3Q12766 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC37.51■■■■□ 3.6
HMGXB3Q12766 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.59
HMGXB3Q12766 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
HMGXB3Q12766 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
HMGXB3Q12766 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
HMGXB3Q12766 AC124016.1-201ENST00000609552 612 ntBASIC37.5■■■■□ 3.59
HMGXB3Q12766 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC37.5■■■■□ 3.59
HMGXB3Q12766 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC37.49■■■■□ 3.59
HMGXB3Q12766 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC37.49■■■■□ 3.59
HMGXB3Q12766 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC37.49■■■■□ 3.59
HMGXB3Q12766 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC37.49■■■■□ 3.59
HMGXB3Q12766 SNX21-213ENST00000614929 587 ntTSL 5 BASIC37.49■■■■□ 3.59
HMGXB3Q12766 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC37.49■■■■□ 3.59
HMGXB3Q12766 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
HMGXB3Q12766 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
HMGXB3Q12766 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
HMGXB3Q12766 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
HMGXB3Q12766 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC37.47■■■■□ 3.59
HMGXB3Q12766 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC37.47■■■■□ 3.59
HMGXB3Q12766 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
HMGXB3Q12766 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
HMGXB3Q12766 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC37.47■■■■□ 3.59
HMGXB3Q12766 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
HMGXB3Q12766 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC37.47■■■■□ 3.59
HMGXB3Q12766 AL445228.2-201ENST00000605589 952 ntBASIC37.47■■■■□ 3.59
HMGXB3Q12766 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC37.47■■■■□ 3.59
HMGXB3Q12766 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC37.47■■■■□ 3.59
HMGXB3Q12766 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC37.47■■■■□ 3.59
HMGXB3Q12766 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
HMGXB3Q12766 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC37.46■■■■□ 3.59
HMGXB3Q12766 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC37.46■■■■□ 3.59
HMGXB3Q12766 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC37.46■■■■□ 3.59
HMGXB3Q12766 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC37.46■■■■□ 3.59
HMGXB3Q12766 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC37.46■■■■□ 3.59
HMGXB3Q12766 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
HMGXB3Q12766 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC37.46■■■■□ 3.59
HMGXB3Q12766 AL355075.4-201ENST00000554988 638 ntBASIC37.46■■■■□ 3.59
HMGXB3Q12766 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
HMGXB3Q12766 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC37.46■■■■□ 3.59
HMGXB3Q12766 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC37.46■■■■□ 3.59
HMGXB3Q12766 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
HMGXB3Q12766 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC37.45■■■■□ 3.59
HMGXB3Q12766 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC37.45■■■■□ 3.59
HMGXB3Q12766 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
HMGXB3Q12766 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC37.45■■■■□ 3.59
HMGXB3Q12766 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC37.45■■■■□ 3.59
HMGXB3Q12766 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC37.45■■■■□ 3.59
HMGXB3Q12766 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC37.45■■■■□ 3.59
HMGXB3Q12766 MIR4785-201ENST00000585005 73 ntBASIC37.45■■■■□ 3.59
HMGXB3Q12766 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
HMGXB3Q12766 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
HMGXB3Q12766 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC37.44■■■■□ 3.58
HMGXB3Q12766 SAPCD2P1-201ENST00000395413 1184 ntBASIC37.44■■■■□ 3.58
HMGXB3Q12766 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC37.44■■■■□ 3.58
HMGXB3Q12766 CDV3P1-201ENST00000471403 739 ntBASIC37.44■■■■□ 3.58
HMGXB3Q12766 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
HMGXB3Q12766 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC37.44■■■■□ 3.58
HMGXB3Q12766 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
HMGXB3Q12766 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC37.44■■■■□ 3.58
HMGXB3Q12766 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC37.44■■■■□ 3.58
HMGXB3Q12766 MTDHP1-201ENST00000605323 784 ntBASIC37.44■■■■□ 3.58
HMGXB3Q12766 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC37.43■■■■□ 3.58
HMGXB3Q12766 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC37.43■■■■□ 3.58
HMGXB3Q12766 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC37.43■■■■□ 3.58
HMGXB3Q12766 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC37.43■■■■□ 3.58
HMGXB3Q12766 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC37.43■■■■□ 3.58
HMGXB3Q12766 AC105020.6-201ENST00000621523 1217 ntBASIC37.43■■■■□ 3.58
HMGXB3Q12766 AC113410.3-201ENST00000623366 203 ntBASIC37.43■■■■□ 3.58
HMGXB3Q12766 CRK-204ENST00000574295 1391 ntTSL 5 BASIC37.43■■■■□ 3.58
HMGXB3Q12766 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC37.43■■■■□ 3.58
HMGXB3Q12766 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
HMGXB3Q12766 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC37.42■■■■□ 3.58
HMGXB3Q12766 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
HMGXB3Q12766 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
HMGXB3Q12766 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC37.42■■■■□ 3.58
HMGXB3Q12766 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC37.42■■■■□ 3.58
HMGXB3Q12766 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC37.42■■■■□ 3.58
HMGXB3Q12766 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC37.42■■■■□ 3.58
HMGXB3Q12766 AC133561.5-201ENST00000635547 218 ntBASIC37.42■■■■□ 3.58
HMGXB3Q12766 GCK-205ENST00000437084 1385 ntTSL 5 BASIC37.42■■■■□ 3.58
HMGXB3Q12766 KRT17P2-201ENST00000300992 1314 ntBASIC37.42■■■■□ 3.58
HMGXB3Q12766 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
HMGXB3Q12766 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC37.41■■■■□ 3.58
HMGXB3Q12766 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
HMGXB3Q12766 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC37.41■■■■□ 3.58
HMGXB3Q12766 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
HMGXB3Q12766 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
HMGXB3Q12766 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC37.41■■■■□ 3.58
HMGXB3Q12766 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
HMGXB3Q12766 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
HMGXB3Q12766 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC37.41■■■■□ 3.58
HMGXB3Q12766 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC37.41■■■■□ 3.58
HMGXB3Q12766 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC37.41■■■■□ 3.58
HMGXB3Q12766 REXO2-208ENST00000539754 791 ntTSL 2 BASIC37.41■■■■□ 3.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms