Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm1P58771 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm1P58771 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm1P58771 Fst-202ENSMUST00000223640 2612 ntBASIC20.5■□□□□ 0.87
Tpm1P58771 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.5■□□□□ 0.87
Tpm1P58771 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.5■□□□□ 0.87
Tpm1P58771 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.5■□□□□ 0.87
Tpm1P58771 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.5■□□□□ 0.87
Tpm1P58771 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.5■□□□□ 0.87
Tpm1P58771 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm1P58771 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm1P58771 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm1P58771 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm1P58771 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm1P58771 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm1P58771 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm1P58771 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm1P58771 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm1P58771 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Tpm1P58771 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.49■□□□□ 0.87
Tpm1P58771 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm1P58771 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm1P58771 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Tpm1P58771 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.49■□□□□ 0.87
Tpm1P58771 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm1P58771 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm1P58771 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm1P58771 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm1P58771 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.49■□□□□ 0.87
Tpm1P58771 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.49■□□□□ 0.87
Tpm1P58771 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Tpm1P58771 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tpm1P58771 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tpm1P58771 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tpm1P58771 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tpm1P58771 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Tpm1P58771 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tpm1P58771 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tpm1P58771 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tpm1P58771 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tpm1P58771 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Tpm1P58771 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tpm1P58771 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tpm1P58771 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tpm1P58771 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Tpm1P58771 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.47■□□□□ 0.87
Tpm1P58771 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
Tpm1P58771 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tpm1P58771 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tpm1P58771 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tpm1P58771 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.46■□□□□ 0.87
Tpm1P58771 Spcs1-204ENSMUST00000226782 949 ntBASIC20.46■□□□□ 0.87
Tpm1P58771 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tpm1P58771 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tpm1P58771 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tpm1P58771 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tpm1P58771 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tpm1P58771 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Tpm1P58771 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tpm1P58771 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Tpm1P58771 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Tpm1P58771 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Tpm1P58771 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Tpm1P58771 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Tpm1P58771 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.45■□□□□ 0.86
Tpm1P58771 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tpm1P58771 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tpm1P58771 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tpm1P58771 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tpm1P58771 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tpm1P58771 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Tpm1P58771 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms