Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC080038.1-201ENST00000611274 1154 ntBASIC23.79■■□□□ 1.4
USP11P51784 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.79■■□□□ 1.4
USP11P51784 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.79■■□□□ 1.4
USP11P51784 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
USP11P51784 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.79■■□□□ 1.4
USP11P51784 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP11P51784 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP11P51784 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.79■■□□□ 1.4
USP11P51784 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP11P51784 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP11P51784 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.78■■□□□ 1.4
USP11P51784 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP11P51784 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.78■■□□□ 1.4
USP11P51784 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP11P51784 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.78■■□□□ 1.4
USP11P51784 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.78■■□□□ 1.4
USP11P51784 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
USP11P51784 DUX4L16-201ENST00000555130 1264 ntBASIC23.78■■□□□ 1.4
USP11P51784 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
USP11P51784 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.78■■□□□ 1.4
USP11P51784 AC010536.3-201ENST00000620306 533 ntBASIC23.78■■□□□ 1.4
USP11P51784 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.78■■□□□ 1.4
USP11P51784 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.78■■□□□ 1.4
USP11P51784 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP11P51784 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.77■■□□□ 1.4
USP11P51784 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.77■■□□□ 1.4
USP11P51784 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
USP11P51784 AC243732.1-201ENST00000612648 864 ntBASIC23.77■■□□□ 1.4
USP11P51784 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
USP11P51784 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
USP11P51784 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP11P51784 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.77■■□□□ 1.4
USP11P51784 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.39
USP11P51784 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP11P51784 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP11P51784 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP11P51784 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.76■■□□□ 1.39
USP11P51784 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.76■■□□□ 1.39
USP11P51784 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.76■■□□□ 1.39
USP11P51784 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP11P51784 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP11P51784 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP11P51784 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.76■■□□□ 1.39
USP11P51784 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.76■■□□□ 1.39
USP11P51784 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
USP11P51784 RBM17P2-201ENST00000616397 1405 ntBASIC23.76■■□□□ 1.39
USP11P51784 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.75■■□□□ 1.39
USP11P51784 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.75■■□□□ 1.39
USP11P51784 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP11P51784 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP11P51784 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
USP11P51784 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.75■■□□□ 1.39
USP11P51784 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP11P51784 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.75■■□□□ 1.39
USP11P51784 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP11P51784 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.75■■□□□ 1.39
USP11P51784 TERF1P5-201ENST00000477545 1207 ntBASIC23.75■■□□□ 1.39
USP11P51784 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.75■■□□□ 1.39
USP11P51784 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.75■■□□□ 1.39
USP11P51784 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP11P51784 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
USP11P51784 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
USP11P51784 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP11P51784 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP11P51784 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
USP11P51784 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP11P51784 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.74■■□□□ 1.39
USP11P51784 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.74■■□□□ 1.39
USP11P51784 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP11P51784 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.74■■□□□ 1.39
USP11P51784 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP11P51784 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.74■■□□□ 1.39
USP11P51784 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP11P51784 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP11P51784 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP11P51784 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP11P51784 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.73■■□□□ 1.39
USP11P51784 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
USP11P51784 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP11P51784 CDCA4P2-201ENST00000441182 718 ntBASIC23.73■■□□□ 1.39
USP11P51784 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
USP11P51784 AC073111.5-205ENST00000641717 521 ntBASIC23.73■■□□□ 1.39
USP11P51784 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.73■■□□□ 1.39
USP11P51784 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP11P51784 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.73■■□□□ 1.39
USP11P51784 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.73■■□□□ 1.39
USP11P51784 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP11P51784 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms