Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.04■□□□□ 0.32
Foxa1P35582 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa1P35582 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa1P35582 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.04■□□□□ 0.32
Foxa1P35582 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.03■□□□□ 0.32
Foxa1P35582 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxa1P35582 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxa1P35582 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.03■□□□□ 0.32
Foxa1P35582 Gm6211-202ENSMUST00000167849 925 ntBASIC17.03■□□□□ 0.32
Foxa1P35582 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxa1P35582 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxa1P35582 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxa1P35582 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Foxa1P35582 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Foxa1P35582 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Foxa1P35582 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Foxa1P35582 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa1P35582 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Foxa1P35582 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa1P35582 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa1P35582 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa1P35582 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Foxa1P35582 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa1P35582 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.02■□□□□ 0.32
Foxa1P35582 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa1P35582 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa1P35582 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa1P35582 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa1P35582 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa1P35582 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.02■□□□□ 0.31
Foxa1P35582 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.02■□□□□ 0.31
Foxa1P35582 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Foxa1P35582 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.01■□□□□ 0.31
Foxa1P35582 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa1P35582 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Foxa1P35582 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa1P35582 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Foxa1P35582 Gm12933-201ENSMUST00000120203 872 ntBASIC17.01■□□□□ 0.31
Foxa1P35582 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.01■□□□□ 0.31
Foxa1P35582 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa1P35582 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa1P35582 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa1P35582 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa1P35582 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa1P35582 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa1P35582 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa1P35582 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa1P35582 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxa1P35582 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxa1P35582 Gm13148-201ENSMUST00000118892 745 ntBASIC17■□□□□ 0.31
Foxa1P35582 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17■□□□□ 0.31
Foxa1P35582 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxa1P35582 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17■□□□□ 0.31
Foxa1P35582 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17■□□□□ 0.31
Foxa1P35582 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxa1P35582 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxa1P35582 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17■□□□□ 0.31
Foxa1P35582 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxa1P35582 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa1P35582 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa1P35582 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Foxa1P35582 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa1P35582 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Foxa1P35582 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.99■□□□□ 0.31
Foxa1P35582 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa1P35582 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa1P35582 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa1P35582 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa1P35582 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.99■□□□□ 0.31
Foxa1P35582 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa1P35582 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa1P35582 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Foxa1P35582 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.98■□□□□ 0.31
Foxa1P35582 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa1P35582 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa1P35582 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa1P35582 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Foxa1P35582 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Foxa1P35582 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa1P35582 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa1P35582 Gm10602-201ENSMUST00000098239 609 ntBASIC16.98■□□□□ 0.31
Foxa1P35582 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa1P35582 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa1P35582 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.98■□□□□ 0.31
Foxa1P35582 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.98■□□□□ 0.31
Foxa1P35582 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa1P35582 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Foxa1P35582 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Foxa1P35582 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa1P35582 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Foxa1P35582 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.97■□□□□ 0.31
Foxa1P35582 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa1P35582 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa1P35582 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa1P35582 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa1P35582 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa1P35582 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Foxa1P35582 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa1P35582 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Foxa1P35582 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms