Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FREM3P0C091 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.08■□□□□ 0.64
FREM3P0C091 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FREM3P0C091 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FREM3P0C091 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.07■□□□□ 0.64
FREM3P0C091 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.07■□□□□ 0.64
FREM3P0C091 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
FREM3P0C091 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.07■□□□□ 0.64
FREM3P0C091 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
FREM3P0C091 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FREM3P0C091 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
FREM3P0C091 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
FREM3P0C091 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FREM3P0C091 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FREM3P0C091 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FREM3P0C091 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.07■□□□□ 0.64
FREM3P0C091 AC068338.2-201ENST00000563278 1430 ntBASIC19.07■□□□□ 0.64
FREM3P0C091 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FREM3P0C091 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
FREM3P0C091 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.07■□□□□ 0.64
FREM3P0C091 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FREM3P0C091 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FREM3P0C091 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.06■□□□□ 0.64
FREM3P0C091 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.06■□□□□ 0.64
FREM3P0C091 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.06■□□□□ 0.64
FREM3P0C091 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.06■□□□□ 0.64
FREM3P0C091 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FREM3P0C091 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
FREM3P0C091 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.06■□□□□ 0.64
FREM3P0C091 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
FREM3P0C091 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.06■□□□□ 0.64
FREM3P0C091 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FREM3P0C091 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
FREM3P0C091 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FREM3P0C091 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.06■□□□□ 0.64
FREM3P0C091 AC010536.3-201ENST00000620306 533 ntBASIC19.06■□□□□ 0.64
FREM3P0C091 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FREM3P0C091 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.06■□□□□ 0.64
FREM3P0C091 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FREM3P0C091 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
FREM3P0C091 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.05■□□□□ 0.64
FREM3P0C091 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.05■□□□□ 0.64
FREM3P0C091 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.05■□□□□ 0.64
FREM3P0C091 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FREM3P0C091 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
FREM3P0C091 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FREM3P0C091 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FREM3P0C091 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
FREM3P0C091 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
FREM3P0C091 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FREM3P0C091 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
FREM3P0C091 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
FREM3P0C091 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
FREM3P0C091 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.05■□□□□ 0.64
FREM3P0C091 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.04■□□□□ 0.64
FREM3P0C091 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 NCF1B-203ENST00000435988 1254 ntBASIC19.04■□□□□ 0.64
FREM3P0C091 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.04■□□□□ 0.64
FREM3P0C091 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.04■□□□□ 0.64
FREM3P0C091 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
FREM3P0C091 AC053503.5-201ENST00000601508 636 ntBASIC19.04■□□□□ 0.64
FREM3P0C091 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.04■□□□□ 0.64
FREM3P0C091 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.04■□□□□ 0.64
FREM3P0C091 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.04■□□□□ 0.64
FREM3P0C091 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.04■□□□□ 0.64
FREM3P0C091 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.04■□□□□ 0.64
FREM3P0C091 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
FREM3P0C091 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.04■□□□□ 0.64
FREM3P0C091 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.04■□□□□ 0.64
FREM3P0C091 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.04■□□□□ 0.64
FREM3P0C091 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.04■□□□□ 0.64
FREM3P0C091 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
FREM3P0C091 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
FREM3P0C091 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FREM3P0C091 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FREM3P0C091 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FREM3P0C091 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FREM3P0C091 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
FREM3P0C091 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.03■□□□□ 0.64
FREM3P0C091 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
FREM3P0C091 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
FREM3P0C091 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
FREM3P0C091 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.03■□□□□ 0.64
FREM3P0C091 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.03■□□□□ 0.64
FREM3P0C091 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.03■□□□□ 0.64
FREM3P0C091 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
FREM3P0C091 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.02■□□□□ 0.64
FREM3P0C091 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FREM3P0C091 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms