Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
P06320 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC11.67□□□□□ -0.54
P06320 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Gm40881-201ENSMUST00000223397 166 ntBASIC11.67□□□□□ -0.54
P06320 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
P06320 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
P06320 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
P06320 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC11.66□□□□□ -0.54
P06320 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC11.66□□□□□ -0.54
P06320 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC11.66□□□□□ -0.54
P06320 Gm43566-201ENSMUST00000196851 808 ntBASIC11.66□□□□□ -0.54
P06320 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
P06320 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Gm10571-201ENSMUST00000097869 1638 ntBASIC11.66□□□□□ -0.54
P06320 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.66□□□□□ -0.54
P06320 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
P06320 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P06320 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC11.65□□□□□ -0.54
P06320 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
P06320 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC11.65□□□□□ -0.54
P06320 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
P06320 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC11.65□□□□□ -0.54
P06320 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
P06320 Gm9870-201ENSMUST00000063874 645 ntBASIC11.65□□□□□ -0.54
P06320 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC11.65□□□□□ -0.54
P06320 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
P06320 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
P06320 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
P06320 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
P06320 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC11.64□□□□□ -0.55
P06320 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
P06320 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC11.64□□□□□ -0.55
P06320 Gm13238-201ENSMUST00000117655 780 ntBASIC11.64□□□□□ -0.55
P06320 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC11.64□□□□□ -0.55
P06320 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Gm10657-201ENSMUST00000193528 1031 ntBASIC11.64□□□□□ -0.55
P06320 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC11.64□□□□□ -0.55
P06320 AC154266.1-201ENSMUST00000223190 503 ntBASIC11.64□□□□□ -0.55
P06320 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
P06320 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P06320 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms