Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6dO55057 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6dO55057 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.54□□□□□ -0.08
Pde6dO55057 Gm12366-201ENSMUST00000121722 873 ntBASIC14.54□□□□□ -0.08
Pde6dO55057 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6dO55057 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6dO55057 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.54□□□□□ -0.08
Pde6dO55057 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.54□□□□□ -0.08
Pde6dO55057 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6dO55057 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.54□□□□□ -0.08
Pde6dO55057 Gm5786-201ENSMUST00000085368 882 ntBASIC14.54□□□□□ -0.08
Pde6dO55057 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6dO55057 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6dO55057 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6dO55057 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pde6dO55057 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6dO55057 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6dO55057 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6dO55057 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.53□□□□□ -0.08
Pde6dO55057 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pde6dO55057 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6dO55057 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.52□□□□□ -0.08
Pde6dO55057 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6dO55057 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.52□□□□□ -0.08
Pde6dO55057 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6dO55057 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6dO55057 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6dO55057 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6dO55057 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.52□□□□□ -0.08
Pde6dO55057 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6dO55057 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6dO55057 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6dO55057 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pde6dO55057 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6dO55057 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6dO55057 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.52□□□□□ -0.09
Pde6dO55057 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Pde6dO55057 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pde6dO55057 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pde6dO55057 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pde6dO55057 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pde6dO55057 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pde6dO55057 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pde6dO55057 Gm40881-201ENSMUST00000223397 166 ntBASIC14.51□□□□□ -0.09
Pde6dO55057 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pde6dO55057 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.5□□□□□ -0.09
Pde6dO55057 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Pde6dO55057 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pde6dO55057 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Pde6dO55057 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Pde6dO55057 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pde6dO55057 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.5□□□□□ -0.09
Pde6dO55057 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pde6dO55057 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Pde6dO55057 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pde6dO55057 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pde6dO55057 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pde6dO55057 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms