Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm12933-201ENSMUST00000120203 872 ntBASIC15.59■□□□□ 0.09
Cpsf4lE9Q2N0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cpsf4lE9Q2N0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf4lE9Q2N0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.59■□□□□ 0.09
Cpsf4lE9Q2N0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.59■□□□□ 0.09
Cpsf4lE9Q2N0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpsf4lE9Q2N0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Cpsf4lE9Q2N0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpsf4lE9Q2N0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpsf4lE9Q2N0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpsf4lE9Q2N0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4lE9Q2N0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4lE9Q2N0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cpsf4lE9Q2N0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4lE9Q2N0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Gm22325-201ENSMUST00000158904 308 ntBASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Cpsf4lE9Q2N0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms