Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx8D3YU81 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.48■□□□□ 0.71
Rfx8D3YU81 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Rfx8D3YU81 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx8D3YU81 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.47■□□□□ 0.71
Rfx8D3YU81 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.47■□□□□ 0.71
Rfx8D3YU81 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx8D3YU81 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx8D3YU81 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.47■□□□□ 0.71
Rfx8D3YU81 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Gm12933-201ENSMUST00000120203 872 ntBASIC19.46■□□□□ 0.71
Rfx8D3YU81 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Gm6365-201ENSMUST00000054711 744 ntBASIC19.46■□□□□ 0.71
Rfx8D3YU81 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx8D3YU81 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx8D3YU81 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Grk6-206ENSMUST00000224995 2971 ntBASIC19.45■□□□□ 0.7
Rfx8D3YU81 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx8D3YU81 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.45■□□□□ 0.7
Rfx8D3YU81 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx8D3YU81 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx8D3YU81 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx8D3YU81 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.43■□□□□ 0.7
Rfx8D3YU81 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx8D3YU81 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx8D3YU81 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx8D3YU81 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.42■□□□□ 0.7
Rfx8D3YU81 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rfx8D3YU81 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx8D3YU81 Rarb-207ENSMUST00000225921 2756 ntBASIC19.42■□□□□ 0.7
Rfx8D3YU81 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx8D3YU81 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx8D3YU81 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.42■□□□□ 0.7
Rfx8D3YU81 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx8D3YU81 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx8D3YU81 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx8D3YU81 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx8D3YU81 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Mir5133-201ENSMUST00000174955 77 ntBASIC19.41■□□□□ 0.7
Rfx8D3YU81 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms