Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ClcnkaQ9WUB7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
ClcnkaQ9WUB7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
ClcnkaQ9WUB7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ClcnkaQ9WUB7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ClcnkaQ9WUB7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ClcnkaQ9WUB7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ClcnkaQ9WUB7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ClcnkaQ9WUB7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ClcnkaQ9WUB7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ClcnkaQ9WUB7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ClcnkaQ9WUB7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ClcnkaQ9WUB7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ClcnkaQ9WUB7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ClcnkaQ9WUB7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ClcnkaQ9WUB7 Amer2-203ENSMUST00000225247 2662 ntBASIC22.66■■□□□ 1.22
ClcnkaQ9WUB7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.65■■□□□ 1.22
ClcnkaQ9WUB7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.65■■□□□ 1.22
ClcnkaQ9WUB7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ClcnkaQ9WUB7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ClcnkaQ9WUB7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
ClcnkaQ9WUB7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
ClcnkaQ9WUB7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ClcnkaQ9WUB7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ClcnkaQ9WUB7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ClcnkaQ9WUB7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
ClcnkaQ9WUB7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ClcnkaQ9WUB7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ClcnkaQ9WUB7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ClcnkaQ9WUB7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.61■■□□□ 1.21
ClcnkaQ9WUB7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.6■■□□□ 1.21
ClcnkaQ9WUB7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ClcnkaQ9WUB7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ClcnkaQ9WUB7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ClcnkaQ9WUB7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
ClcnkaQ9WUB7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ClcnkaQ9WUB7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ClcnkaQ9WUB7 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.55■■□□□ 1.2
ClcnkaQ9WUB7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
ClcnkaQ9WUB7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ClcnkaQ9WUB7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ClcnkaQ9WUB7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
ClcnkaQ9WUB7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ClcnkaQ9WUB7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
ClcnkaQ9WUB7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ClcnkaQ9WUB7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ClcnkaQ9WUB7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
ClcnkaQ9WUB7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ClcnkaQ9WUB7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ClcnkaQ9WUB7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ClcnkaQ9WUB7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ClcnkaQ9WUB7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ClcnkaQ9WUB7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.49■■□□□ 1.19
ClcnkaQ9WUB7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.49■■□□□ 1.19
ClcnkaQ9WUB7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ClcnkaQ9WUB7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.48■■□□□ 1.19
ClcnkaQ9WUB7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ClcnkaQ9WUB7 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.45■■□□□ 1.18
ClcnkaQ9WUB7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ClcnkaQ9WUB7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.45■■□□□ 1.18
ClcnkaQ9WUB7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ClcnkaQ9WUB7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ClcnkaQ9WUB7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
ClcnkaQ9WUB7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
ClcnkaQ9WUB7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ClcnkaQ9WUB7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ClcnkaQ9WUB7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.44■■□□□ 1.18
ClcnkaQ9WUB7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.43■■□□□ 1.18
ClcnkaQ9WUB7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
ClcnkaQ9WUB7 Gm9397-201ENSMUST00000200125 605 ntBASIC22.43■■□□□ 1.18
ClcnkaQ9WUB7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.43■■□□□ 1.18
ClcnkaQ9WUB7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ClcnkaQ9WUB7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ClcnkaQ9WUB7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
ClcnkaQ9WUB7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
ClcnkaQ9WUB7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ClcnkaQ9WUB7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.41■■□□□ 1.18
ClcnkaQ9WUB7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ClcnkaQ9WUB7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ClcnkaQ9WUB7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.39■■□□□ 1.17
ClcnkaQ9WUB7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.39■■□□□ 1.17
ClcnkaQ9WUB7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.38■■□□□ 1.17
ClcnkaQ9WUB7 Gm45855-201ENSMUST00000212546 880 ntBASIC22.38■■□□□ 1.17
ClcnkaQ9WUB7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ClcnkaQ9WUB7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ClcnkaQ9WUB7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ClcnkaQ9WUB7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ClcnkaQ9WUB7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ClcnkaQ9WUB7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ClcnkaQ9WUB7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ClcnkaQ9WUB7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ClcnkaQ9WUB7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ClcnkaQ9WUB7 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.33■■□□□ 1.17
ClcnkaQ9WUB7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.33■■□□□ 1.17
ClcnkaQ9WUB7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ClcnkaQ9WUB7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
ClcnkaQ9WUB7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
ClcnkaQ9WUB7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ClcnkaQ9WUB7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.3■■□□□ 1.16
ClcnkaQ9WUB7 Gm24970-201ENSMUST00000175582 82 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms