Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Vps35Q9EQH3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Vps35Q9EQH3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Vps35Q9EQH3 Gm45855-201ENSMUST00000212546 880 ntBASIC24.69■■□□□ 1.54
Vps35Q9EQH3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Vps35Q9EQH3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.68■■□□□ 1.54
Vps35Q9EQH3 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.68■■□□□ 1.54
Vps35Q9EQH3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Vps35Q9EQH3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Vps35Q9EQH3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Vps35Q9EQH3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Vps35Q9EQH3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vps35Q9EQH3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vps35Q9EQH3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Vps35Q9EQH3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Vps35Q9EQH3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vps35Q9EQH3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Vps35Q9EQH3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.63■■□□□ 1.53
Vps35Q9EQH3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Vps35Q9EQH3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Vps35Q9EQH3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Vps35Q9EQH3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Vps35Q9EQH3 Gm24970-201ENSMUST00000175582 82 ntBASIC24.62■■□□□ 1.53
Vps35Q9EQH3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.61■■□□□ 1.53
Vps35Q9EQH3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.61■■□□□ 1.53
Vps35Q9EQH3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Vps35Q9EQH3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Vps35Q9EQH3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Vps35Q9EQH3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Vps35Q9EQH3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.6■■□□□ 1.53
Vps35Q9EQH3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Vps35Q9EQH3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Vps35Q9EQH3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Vps35Q9EQH3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Vps35Q9EQH3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Vps35Q9EQH3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Vps35Q9EQH3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Vps35Q9EQH3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Vps35Q9EQH3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Vps35Q9EQH3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.55■■□□□ 1.52
Vps35Q9EQH3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Vps35Q9EQH3 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.54■■□□□ 1.52
Vps35Q9EQH3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vps35Q9EQH3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Vps35Q9EQH3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vps35Q9EQH3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Vps35Q9EQH3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Vps35Q9EQH3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Vps35Q9EQH3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Vps35Q9EQH3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Vps35Q9EQH3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Vps35Q9EQH3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.49■■□□□ 1.51
Vps35Q9EQH3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Vps35Q9EQH3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Vps35Q9EQH3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.48■■□□□ 1.51
Vps35Q9EQH3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Vps35Q9EQH3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
Vps35Q9EQH3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vps35Q9EQH3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Vps35Q9EQH3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Vps35Q9EQH3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.45■■□□□ 1.5
Vps35Q9EQH3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
Vps35Q9EQH3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Vps35Q9EQH3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Vps35Q9EQH3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Vps35Q9EQH3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Vps35Q9EQH3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.43■■□□□ 1.5
Vps35Q9EQH3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Vps35Q9EQH3 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.42■■□□□ 1.5
Vps35Q9EQH3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Vps35Q9EQH3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Vps35Q9EQH3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.4■■□□□ 1.5
Vps35Q9EQH3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Vps35Q9EQH3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.39■■□□□ 1.49
Vps35Q9EQH3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Vps35Q9EQH3 Amer2-203ENSMUST00000225247 2662 ntBASIC24.39■■□□□ 1.49
Vps35Q9EQH3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Vps35Q9EQH3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Vps35Q9EQH3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
Vps35Q9EQH3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Vps35Q9EQH3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
Vps35Q9EQH3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Vps35Q9EQH3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vps35Q9EQH3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Vps35Q9EQH3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vps35Q9EQH3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vps35Q9EQH3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Vps35Q9EQH3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.36■■□□□ 1.49
Vps35Q9EQH3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Vps35Q9EQH3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vps35Q9EQH3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vps35Q9EQH3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Vps35Q9EQH3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Vps35Q9EQH3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Vps35Q9EQH3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Vps35Q9EQH3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.31■■□□□ 1.48
Vps35Q9EQH3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Vps35Q9EQH3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.3■■□□□ 1.48
Vps35Q9EQH3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vps35Q9EQH3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms