Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.27■■■□□ 2.12
Lysmd1Q9D0E3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Lysmd1Q9D0E3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Lysmd1Q9D0E3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Lysmd1Q9D0E3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.23■■■□□ 2.11
Lysmd1Q9D0E3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Lysmd1Q9D0E3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.22■■■□□ 2.11
Lysmd1Q9D0E3 Gm22567-201ENSMUST00000175542 342 ntBASIC28.21■■■□□ 2.11
Lysmd1Q9D0E3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Lysmd1Q9D0E3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.2■■■□□ 2.1
Lysmd1Q9D0E3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.2■■■□□ 2.1
Lysmd1Q9D0E3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Lysmd1Q9D0E3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Lysmd1Q9D0E3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Lysmd1Q9D0E3 Gm6311-201ENSMUST00000073790 878 ntBASIC28.17■■■□□ 2.1
Lysmd1Q9D0E3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Lysmd1Q9D0E3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Lysmd1Q9D0E3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.15■■■□□ 2.1
Lysmd1Q9D0E3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.15■■■□□ 2.1
Lysmd1Q9D0E3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Lysmd1Q9D0E3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Lysmd1Q9D0E3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Lysmd1Q9D0E3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
Lysmd1Q9D0E3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Lysmd1Q9D0E3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Lysmd1Q9D0E3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Lysmd1Q9D0E3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Lysmd1Q9D0E3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Lysmd1Q9D0E3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Lysmd1Q9D0E3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.03■■■□□ 2.08
Lysmd1Q9D0E3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Lysmd1Q9D0E3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Lysmd1Q9D0E3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
Lysmd1Q9D0E3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Lysmd1Q9D0E3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Lysmd1Q9D0E3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Lysmd1Q9D0E3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Lysmd1Q9D0E3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.99■■■□□ 2.07
Lysmd1Q9D0E3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Lysmd1Q9D0E3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Lysmd1Q9D0E3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Lysmd1Q9D0E3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Lysmd1Q9D0E3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.95■■■□□ 2.06
Lysmd1Q9D0E3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Lysmd1Q9D0E3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Lysmd1Q9D0E3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.93■■■□□ 2.06
Lysmd1Q9D0E3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.93■■■□□ 2.06
Lysmd1Q9D0E3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.93■■■□□ 2.06
Lysmd1Q9D0E3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Lysmd1Q9D0E3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Lysmd1Q9D0E3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Lysmd1Q9D0E3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Lysmd1Q9D0E3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Lysmd1Q9D0E3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Lysmd1Q9D0E3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Lysmd1Q9D0E3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Lysmd1Q9D0E3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Lysmd1Q9D0E3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
Lysmd1Q9D0E3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.89■■■□□ 2.06
Lysmd1Q9D0E3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Lysmd1Q9D0E3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
Lysmd1Q9D0E3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.88■■■□□ 2.05
Lysmd1Q9D0E3 Gm12366-201ENSMUST00000121722 873 ntBASIC27.88■■■□□ 2.05
Lysmd1Q9D0E3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.88■■■□□ 2.05
Lysmd1Q9D0E3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.88■■■□□ 2.05
Lysmd1Q9D0E3 Gm5786-201ENSMUST00000085368 882 ntBASIC27.88■■■□□ 2.05
Lysmd1Q9D0E3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Lysmd1Q9D0E3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Lysmd1Q9D0E3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Lysmd1Q9D0E3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.86■■■□□ 2.05
Lysmd1Q9D0E3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Lysmd1Q9D0E3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.86■■■□□ 2.05
Lysmd1Q9D0E3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.85■■■□□ 2.05
Lysmd1Q9D0E3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Lysmd1Q9D0E3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC27.83■■■□□ 2.05
Lysmd1Q9D0E3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Lysmd1Q9D0E3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Lysmd1Q9D0E3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Lysmd1Q9D0E3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Lysmd1Q9D0E3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Lysmd1Q9D0E3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Lysmd1Q9D0E3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.8■■■□□ 2.04
Lysmd1Q9D0E3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Lysmd1Q9D0E3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Lysmd1Q9D0E3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.78■■■□□ 2.04
Lysmd1Q9D0E3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Lysmd1Q9D0E3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Lysmd1Q9D0E3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Lysmd1Q9D0E3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.77■■■□□ 2.04
Lysmd1Q9D0E3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.76■■■□□ 2.03
Lysmd1Q9D0E3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.76■■■□□ 2.03
Lysmd1Q9D0E3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Lysmd1Q9D0E3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.74■■■□□ 2.03
Lysmd1Q9D0E3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Lysmd1Q9D0E3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.72■■■□□ 2.03
Lysmd1Q9D0E3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Lysmd1Q9D0E3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC27.71■■■□□ 2.03
Lysmd1Q9D0E3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.71■■■□□ 2.03
Lysmd1Q9D0E3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Lysmd1Q9D0E3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms