Protein–RNA interactions for Protein: Q9CRC3

UPF0235 protein C15orf40 homolog, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CRC3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Q9CRC3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q9CRC3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Q9CRC3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Q9CRC3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Q9CRC3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q9CRC3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Q9CRC3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q9CRC3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q9CRC3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q9CRC3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CRC3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CRC3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q9CRC3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9CRC3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q9CRC3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9CRC3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9CRC3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9CRC3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9CRC3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q9CRC3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q9CRC3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Q9CRC3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q9CRC3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q9CRC3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CRC3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q9CRC3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.65■□□□□ 0.74
Q9CRC3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CRC3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CRC3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.65■□□□□ 0.74
Q9CRC3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q9CRC3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9CRC3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q9CRC3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9CRC3 Gm23366-201ENSMUST00000175022 89 ntBASIC19.63■□□□□ 0.73
Q9CRC3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Q9CRC3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Q9CRC3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Q9CRC3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CRC3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CRC3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CRC3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9CRC3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CRC3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CRC3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Q9CRC3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9CRC3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CRC3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9CRC3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Q9CRC3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CRC3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
Q9CRC3 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.57■□□□□ 0.72
Q9CRC3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CRC3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CRC3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CRC3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CRC3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CRC3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CRC3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CRC3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CRC3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CRC3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Q9CRC3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q9CRC3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q9CRC3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q9CRC3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Q9CRC3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.52■□□□□ 0.72
Q9CRC3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q9CRC3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q9CRC3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q9CRC3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CRC3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CRC3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CRC3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CRC3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q9CRC3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q9CRC3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CRC3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CRC3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CRC3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CRC3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9CRC3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Q9CRC3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9CRC3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q9CRC3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Q9CRC3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Q9CRC3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CRC3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Q9CRC3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Q9CRC3 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.43■□□□□ 0.7
Q9CRC3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q9CRC3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9CRC3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CRC3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CRC3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CRC3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CRC3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9CRC3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Q9CRC3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q9CRC3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms