Protein–RNA interactions for Protein: Q9CQC7

Ndufb4, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb4Q9CQC7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndufb4Q9CQC7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Ndufb4Q9CQC7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ndufb4Q9CQC7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ndufb4Q9CQC7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndufb4Q9CQC7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ndufb4Q9CQC7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ndufb4Q9CQC7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ndufb4Q9CQC7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ndufb4Q9CQC7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndufb4Q9CQC7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ndufb4Q9CQC7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ndufb4Q9CQC7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ndufb4Q9CQC7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ndufb4Q9CQC7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.22■□□□□ 0.51
Ndufb4Q9CQC7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ndufb4Q9CQC7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ndufb4Q9CQC7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Ndufb4Q9CQC7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ndufb4Q9CQC7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ndufb4Q9CQC7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.19■□□□□ 0.5
Ndufb4Q9CQC7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ndufb4Q9CQC7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ndufb4Q9CQC7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.19■□□□□ 0.5
Ndufb4Q9CQC7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.18■□□□□ 0.5
Ndufb4Q9CQC7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.18■□□□□ 0.5
Ndufb4Q9CQC7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ndufb4Q9CQC7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufb4Q9CQC7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufb4Q9CQC7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufb4Q9CQC7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufb4Q9CQC7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ndufb4Q9CQC7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ndufb4Q9CQC7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ndufb4Q9CQC7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ndufb4Q9CQC7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufb4Q9CQC7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufb4Q9CQC7 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.15■□□□□ 0.5
Ndufb4Q9CQC7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufb4Q9CQC7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ndufb4Q9CQC7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ndufb4Q9CQC7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufb4Q9CQC7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ndufb4Q9CQC7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ndufb4Q9CQC7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndufb4Q9CQC7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndufb4Q9CQC7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ndufb4Q9CQC7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndufb4Q9CQC7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ndufb4Q9CQC7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ndufb4Q9CQC7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.11■□□□□ 0.49
Ndufb4Q9CQC7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.1■□□□□ 0.49
Ndufb4Q9CQC7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ndufb4Q9CQC7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndufb4Q9CQC7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ndufb4Q9CQC7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ndufb4Q9CQC7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.1■□□□□ 0.49
Ndufb4Q9CQC7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ndufb4Q9CQC7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ndufb4Q9CQC7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndufb4Q9CQC7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ndufb4Q9CQC7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.07■□□□□ 0.48
Ndufb4Q9CQC7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndufb4Q9CQC7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ndufb4Q9CQC7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ndufb4Q9CQC7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.06■□□□□ 0.48
Ndufb4Q9CQC7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ndufb4Q9CQC7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ndufb4Q9CQC7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ndufb4Q9CQC7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndufb4Q9CQC7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndufb4Q9CQC7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndufb4Q9CQC7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ndufb4Q9CQC7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ndufb4Q9CQC7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndufb4Q9CQC7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndufb4Q9CQC7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndufb4Q9CQC7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndufb4Q9CQC7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Ndufb4Q9CQC7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.02■□□□□ 0.48
Ndufb4Q9CQC7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndufb4Q9CQC7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndufb4Q9CQC7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufb4Q9CQC7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufb4Q9CQC7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndufb4Q9CQC7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufb4Q9CQC7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18■□□□□ 0.47
Ndufb4Q9CQC7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndufb4Q9CQC7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufb4Q9CQC7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufb4Q9CQC7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ndufb4Q9CQC7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndufb4Q9CQC7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufb4Q9CQC7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufb4Q9CQC7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufb4Q9CQC7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufb4Q9CQC7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.97■□□□□ 0.47
Ndufb4Q9CQC7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufb4Q9CQC7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndufb4Q9CQC7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms