Protein–RNA interactions for Protein: Q9CPN9

2210010C04Rik, RIKEN cDNA 2210010C04 gene, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210010C04RikQ9CPN9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
2210010C04RikQ9CPN9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
2210010C04RikQ9CPN9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
2210010C04RikQ9CPN9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
2210010C04RikQ9CPN9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
2210010C04RikQ9CPN9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
2210010C04RikQ9CPN9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.21■□□□□ 0.99
2210010C04RikQ9CPN9 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.21■□□□□ 0.99
2210010C04RikQ9CPN9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
2210010C04RikQ9CPN9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
2210010C04RikQ9CPN9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
2210010C04RikQ9CPN9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.17■□□□□ 0.98
2210010C04RikQ9CPN9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
2210010C04RikQ9CPN9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
2210010C04RikQ9CPN9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
2210010C04RikQ9CPN9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
2210010C04RikQ9CPN9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
2210010C04RikQ9CPN9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
2210010C04RikQ9CPN9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
2210010C04RikQ9CPN9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
2210010C04RikQ9CPN9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
2210010C04RikQ9CPN9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
2210010C04RikQ9CPN9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
2210010C04RikQ9CPN9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.14■□□□□ 0.97
2210010C04RikQ9CPN9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
2210010C04RikQ9CPN9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
2210010C04RikQ9CPN9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
2210010C04RikQ9CPN9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
2210010C04RikQ9CPN9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
2210010C04RikQ9CPN9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
2210010C04RikQ9CPN9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
2210010C04RikQ9CPN9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
2210010C04RikQ9CPN9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
2210010C04RikQ9CPN9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
2210010C04RikQ9CPN9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
2210010C04RikQ9CPN9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
2210010C04RikQ9CPN9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
2210010C04RikQ9CPN9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
2210010C04RikQ9CPN9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
2210010C04RikQ9CPN9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
2210010C04RikQ9CPN9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
2210010C04RikQ9CPN9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
2210010C04RikQ9CPN9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.08■□□□□ 0.96
2210010C04RikQ9CPN9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
2210010C04RikQ9CPN9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
2210010C04RikQ9CPN9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
2210010C04RikQ9CPN9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
2210010C04RikQ9CPN9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
2210010C04RikQ9CPN9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
2210010C04RikQ9CPN9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
2210010C04RikQ9CPN9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
2210010C04RikQ9CPN9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
2210010C04RikQ9CPN9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
2210010C04RikQ9CPN9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
2210010C04RikQ9CPN9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
2210010C04RikQ9CPN9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
2210010C04RikQ9CPN9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.01■□□□□ 0.95
2210010C04RikQ9CPN9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
2210010C04RikQ9CPN9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
2210010C04RikQ9CPN9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
2210010C04RikQ9CPN9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
2210010C04RikQ9CPN9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
2210010C04RikQ9CPN9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
2210010C04RikQ9CPN9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
2210010C04RikQ9CPN9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21■□□□□ 0.95
2210010C04RikQ9CPN9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
2210010C04RikQ9CPN9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
2210010C04RikQ9CPN9 Gm16148-201ENSMUST00000119653 893 ntBASIC20.98■□□□□ 0.95
2210010C04RikQ9CPN9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.97■□□□□ 0.95
2210010C04RikQ9CPN9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
2210010C04RikQ9CPN9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.97■□□□□ 0.95
2210010C04RikQ9CPN9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
2210010C04RikQ9CPN9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
2210010C04RikQ9CPN9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
2210010C04RikQ9CPN9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
2210010C04RikQ9CPN9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
2210010C04RikQ9CPN9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.92■□□□□ 0.94
2210010C04RikQ9CPN9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
2210010C04RikQ9CPN9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.92■□□□□ 0.94
2210010C04RikQ9CPN9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
2210010C04RikQ9CPN9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
2210010C04RikQ9CPN9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
2210010C04RikQ9CPN9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.91■□□□□ 0.94
2210010C04RikQ9CPN9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
2210010C04RikQ9CPN9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
2210010C04RikQ9CPN9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
2210010C04RikQ9CPN9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
2210010C04RikQ9CPN9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
2210010C04RikQ9CPN9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
2210010C04RikQ9CPN9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
2210010C04RikQ9CPN9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
2210010C04RikQ9CPN9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
2210010C04RikQ9CPN9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
2210010C04RikQ9CPN9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
2210010C04RikQ9CPN9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
2210010C04RikQ9CPN9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
2210010C04RikQ9CPN9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
2210010C04RikQ9CPN9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
2210010C04RikQ9CPN9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
2210010C04RikQ9CPN9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms