Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.92■■□□□ 1.74
Pcdhgb1Q91XX8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdhgb1Q91XX8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdhgb1Q91XX8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Pcdhgb1Q91XX8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.89■■□□□ 1.73
Pcdhgb1Q91XX8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.88■■□□□ 1.73
Pcdhgb1Q91XX8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhgb1Q91XX8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Pcdhgb1Q91XX8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdhgb1Q91XX8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Pcdhgb1Q91XX8 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.87■■□□□ 1.73
Pcdhgb1Q91XX8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhgb1Q91XX8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhgb1Q91XX8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhgb1Q91XX8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhgb1Q91XX8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhgb1Q91XX8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.83■■□□□ 1.73
Pcdhgb1Q91XX8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhgb1Q91XX8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhgb1Q91XX8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhgb1Q91XX8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhgb1Q91XX8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdhgb1Q91XX8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Pcdhgb1Q91XX8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhgb1Q91XX8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhgb1Q91XX8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
Pcdhgb1Q91XX8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhgb1Q91XX8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.72
Pcdhgb1Q91XX8 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.76■■□□□ 1.71
Pcdhgb1Q91XX8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhgb1Q91XX8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhgb1Q91XX8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhgb1Q91XX8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Pcdhgb1Q91XX8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhgb1Q91XX8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhgb1Q91XX8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhgb1Q91XX8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhgb1Q91XX8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhgb1Q91XX8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
Pcdhgb1Q91XX8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.73■■□□□ 1.71
Pcdhgb1Q91XX8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhgb1Q91XX8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhgb1Q91XX8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhgb1Q91XX8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhgb1Q91XX8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhgb1Q91XX8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Pcdhgb1Q91XX8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhgb1Q91XX8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhgb1Q91XX8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhgb1Q91XX8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.68■■□□□ 1.7
Pcdhgb1Q91XX8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.67■■□□□ 1.7
Pcdhgb1Q91XX8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhgb1Q91XX8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Pcdhgb1Q91XX8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhgb1Q91XX8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhgb1Q91XX8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhgb1Q91XX8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdhgb1Q91XX8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhgb1Q91XX8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhgb1Q91XX8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Pcdhgb1Q91XX8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhgb1Q91XX8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Pcdhgb1Q91XX8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhgb1Q91XX8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Pcdhgb1Q91XX8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhgb1Q91XX8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhgb1Q91XX8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhgb1Q91XX8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.59■■□□□ 1.69
Pcdhgb1Q91XX8 Gm6821-201ENSMUST00000107540 542 ntBASIC25.59■■□□□ 1.69
Pcdhgb1Q91XX8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhgb1Q91XX8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhgb1Q91XX8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.56■■□□□ 1.68
Pcdhgb1Q91XX8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhgb1Q91XX8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhgb1Q91XX8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhgb1Q91XX8 Gm8503-201ENSMUST00000118131 455 ntBASIC25.54■■□□□ 1.68
Pcdhgb1Q91XX8 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.54■■□□□ 1.68
Pcdhgb1Q91XX8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhgb1Q91XX8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.53■■□□□ 1.68
Pcdhgb1Q91XX8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Pcdhgb1Q91XX8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhgb1Q91XX8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
Pcdhgb1Q91XX8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhgb1Q91XX8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhgb1Q91XX8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhgb1Q91XX8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.5■■□□□ 1.67
Pcdhgb1Q91XX8 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.5■■□□□ 1.67
Pcdhgb1Q91XX8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhgb1Q91XX8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhgb1Q91XX8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhgb1Q91XX8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.47■■□□□ 1.67
Pcdhgb1Q91XX8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhgb1Q91XX8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhgb1Q91XX8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhgb1Q91XX8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhgb1Q91XX8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.42■■□□□ 1.66
Pcdhgb1Q91XX8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.42■■□□□ 1.66
Pcdhgb1Q91XX8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhgb1Q91XX8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhgb1Q91XX8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms