Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Trim60Q8VI40 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim60Q8VI40 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.56■■□□□ 1.68
Trim60Q8VI40 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trim60Q8VI40 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim60Q8VI40 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim60Q8VI40 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim60Q8VI40 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim60Q8VI40 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Trim60Q8VI40 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Trim60Q8VI40 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.5■■□□□ 1.67
Trim60Q8VI40 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim60Q8VI40 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trim60Q8VI40 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Trim60Q8VI40 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
Trim60Q8VI40 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim60Q8VI40 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim60Q8VI40 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Trim60Q8VI40 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
Trim60Q8VI40 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Trim60Q8VI40 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.46■■□□□ 1.67
Trim60Q8VI40 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.46■■□□□ 1.67
Trim60Q8VI40 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Trim60Q8VI40 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.45■■□□□ 1.66
Trim60Q8VI40 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trim60Q8VI40 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim60Q8VI40 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim60Q8VI40 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim60Q8VI40 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim60Q8VI40 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.41■■□□□ 1.66
Trim60Q8VI40 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.41■■□□□ 1.66
Trim60Q8VI40 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Trim60Q8VI40 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.39■■□□□ 1.65
Trim60Q8VI40 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim60Q8VI40 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Trim60Q8VI40 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim60Q8VI40 Gm24804-201ENSMUST00000174982 85 ntBASIC25.36■■□□□ 1.65
Trim60Q8VI40 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Trim60Q8VI40 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Trim60Q8VI40 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Trim60Q8VI40 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Trim60Q8VI40 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Trim60Q8VI40 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim60Q8VI40 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Trim60Q8VI40 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim60Q8VI40 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trim60Q8VI40 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trim60Q8VI40 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trim60Q8VI40 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trim60Q8VI40 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trim60Q8VI40 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim60Q8VI40 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Trim60Q8VI40 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Trim60Q8VI40 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Trim60Q8VI40 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim60Q8VI40 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Trim60Q8VI40 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim60Q8VI40 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Trim60Q8VI40 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trim60Q8VI40 Gm16148-201ENSMUST00000119653 893 ntBASIC25.27■■□□□ 1.64
Trim60Q8VI40 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim60Q8VI40 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Trim60Q8VI40 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim60Q8VI40 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim60Q8VI40 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim60Q8VI40 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim60Q8VI40 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Trim60Q8VI40 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Trim60Q8VI40 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trim60Q8VI40 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Trim60Q8VI40 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trim60Q8VI40 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trim60Q8VI40 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Trim60Q8VI40 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim60Q8VI40 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim60Q8VI40 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trim60Q8VI40 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trim60Q8VI40 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trim60Q8VI40 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Trim60Q8VI40 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Trim60Q8VI40 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim60Q8VI40 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim60Q8VI40 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim60Q8VI40 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.17■■□□□ 1.62
Trim60Q8VI40 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim60Q8VI40 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trim60Q8VI40 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trim60Q8VI40 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trim60Q8VI40 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trim60Q8VI40 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Trim60Q8VI40 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Trim60Q8VI40 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.13■■□□□ 1.61
Trim60Q8VI40 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Trim60Q8VI40 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim60Q8VI40 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim60Q8VI40 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim60Q8VI40 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Trim60Q8VI40 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Trim60Q8VI40 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trim60Q8VI40 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms