Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.15■□□□□ 0.82
Nup35Q8R4R6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Nup35Q8R4R6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nup35Q8R4R6 Gm27322-201ENSMUST00000184007 104 ntBASIC20.14■□□□□ 0.81
Nup35Q8R4R6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
Nup35Q8R4R6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup35Q8R4R6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Nup35Q8R4R6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.13■□□□□ 0.81
Nup35Q8R4R6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nup35Q8R4R6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nup35Q8R4R6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup35Q8R4R6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.12■□□□□ 0.81
Nup35Q8R4R6 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.12■□□□□ 0.81
Nup35Q8R4R6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Nup35Q8R4R6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nup35Q8R4R6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nup35Q8R4R6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.11■□□□□ 0.81
Nup35Q8R4R6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Nup35Q8R4R6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Nup35Q8R4R6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.11■□□□□ 0.81
Nup35Q8R4R6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup35Q8R4R6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup35Q8R4R6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nup35Q8R4R6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup35Q8R4R6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup35Q8R4R6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.09■□□□□ 0.81
Nup35Q8R4R6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.08■□□□□ 0.81
Nup35Q8R4R6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nup35Q8R4R6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nup35Q8R4R6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup35Q8R4R6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup35Q8R4R6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup35Q8R4R6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup35Q8R4R6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup35Q8R4R6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup35Q8R4R6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup35Q8R4R6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nup35Q8R4R6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Nup35Q8R4R6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.04■□□□□ 0.8
Nup35Q8R4R6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nup35Q8R4R6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup35Q8R4R6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Nup35Q8R4R6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nup35Q8R4R6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Nup35Q8R4R6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup35Q8R4R6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20■□□□□ 0.79
Nup35Q8R4R6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup35Q8R4R6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup35Q8R4R6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup35Q8R4R6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nup35Q8R4R6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup35Q8R4R6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nup35Q8R4R6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup35Q8R4R6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup35Q8R4R6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup35Q8R4R6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup35Q8R4R6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup35Q8R4R6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Nup35Q8R4R6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nup35Q8R4R6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup35Q8R4R6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup35Q8R4R6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup35Q8R4R6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup35Q8R4R6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup35Q8R4R6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup35Q8R4R6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Nup35Q8R4R6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup35Q8R4R6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup35Q8R4R6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Nup35Q8R4R6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nup35Q8R4R6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup35Q8R4R6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup35Q8R4R6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup35Q8R4R6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup35Q8R4R6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup35Q8R4R6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup35Q8R4R6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup35Q8R4R6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup35Q8R4R6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nup35Q8R4R6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nup35Q8R4R6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup35Q8R4R6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Nup35Q8R4R6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Nup35Q8R4R6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup35Q8R4R6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup35Q8R4R6 Peli2-204ENSMUST00000226513 1320 ntBASIC19.86■□□□□ 0.77
Nup35Q8R4R6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup35Q8R4R6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nup35Q8R4R6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup35Q8R4R6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.84■□□□□ 0.77
Nup35Q8R4R6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup35Q8R4R6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup35Q8R4R6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nup35Q8R4R6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Nup35Q8R4R6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nup35Q8R4R6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Nup35Q8R4R6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup35Q8R4R6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup35Q8R4R6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
Nup35Q8R4R6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms