Protein–RNA interactions for Protein: Q8R1E9

Scgb2b27, ABPBG27, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b27Q8R1E9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Scgb2b27Q8R1E9 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.45■■□□□ 1.02
Scgb2b27Q8R1E9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scgb2b27Q8R1E9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Scgb2b27Q8R1E9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scgb2b27Q8R1E9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.44■■□□□ 1.02
Scgb2b27Q8R1E9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scgb2b27Q8R1E9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scgb2b27Q8R1E9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.43■■□□□ 1.02
Scgb2b27Q8R1E9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Scgb2b27Q8R1E9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scgb2b27Q8R1E9 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.42■■□□□ 1.02
Scgb2b27Q8R1E9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scgb2b27Q8R1E9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scgb2b27Q8R1E9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scgb2b27Q8R1E9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.4■■□□□ 1.02
Scgb2b27Q8R1E9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scgb2b27Q8R1E9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Scgb2b27Q8R1E9 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.39■■□□□ 1.01
Scgb2b27Q8R1E9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scgb2b27Q8R1E9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scgb2b27Q8R1E9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Scgb2b27Q8R1E9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scgb2b27Q8R1E9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scgb2b27Q8R1E9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scgb2b27Q8R1E9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scgb2b27Q8R1E9 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.34■■□□□ 1.01
Scgb2b27Q8R1E9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scgb2b27Q8R1E9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.34■■□□□ 1.01
Scgb2b27Q8R1E9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.34■■□□□ 1.01
Scgb2b27Q8R1E9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scgb2b27Q8R1E9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.33■■□□□ 1.01
Scgb2b27Q8R1E9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scgb2b27Q8R1E9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scgb2b27Q8R1E9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scgb2b27Q8R1E9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.32■■□□□ 1
Scgb2b27Q8R1E9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scgb2b27Q8R1E9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Scgb2b27Q8R1E9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scgb2b27Q8R1E9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scgb2b27Q8R1E9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.31■■□□□ 1
Scgb2b27Q8R1E9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.3■■□□□ 1
Scgb2b27Q8R1E9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.29■■□□□ 1
Scgb2b27Q8R1E9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.29■■□□□ 1
Scgb2b27Q8R1E9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scgb2b27Q8R1E9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scgb2b27Q8R1E9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scgb2b27Q8R1E9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scgb2b27Q8R1E9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scgb2b27Q8R1E9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scgb2b27Q8R1E9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Scgb2b27Q8R1E9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scgb2b27Q8R1E9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.26■□□□□ 0.99
Scgb2b27Q8R1E9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scgb2b27Q8R1E9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.26■□□□□ 0.99
Scgb2b27Q8R1E9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scgb2b27Q8R1E9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Scgb2b27Q8R1E9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.22■□□□□ 0.99
Scgb2b27Q8R1E9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scgb2b27Q8R1E9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scgb2b27Q8R1E9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.21■□□□□ 0.99
Scgb2b27Q8R1E9 Gm9397-201ENSMUST00000200125 605 ntBASIC21.21■□□□□ 0.99
Scgb2b27Q8R1E9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.21■□□□□ 0.99
Scgb2b27Q8R1E9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scgb2b27Q8R1E9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Scgb2b27Q8R1E9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Scgb2b27Q8R1E9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Scgb2b27Q8R1E9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Scgb2b27Q8R1E9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scgb2b27Q8R1E9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scgb2b27Q8R1E9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scgb2b27Q8R1E9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scgb2b27Q8R1E9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.18■□□□□ 0.98
Scgb2b27Q8R1E9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.18■□□□□ 0.98
Scgb2b27Q8R1E9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scgb2b27Q8R1E9 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.17■□□□□ 0.98
Scgb2b27Q8R1E9 Gm45855-201ENSMUST00000212546 880 ntBASIC21.17■□□□□ 0.98
Scgb2b27Q8R1E9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.17■□□□□ 0.98
Scgb2b27Q8R1E9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scgb2b27Q8R1E9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scgb2b27Q8R1E9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scgb2b27Q8R1E9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scgb2b27Q8R1E9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scgb2b27Q8R1E9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scgb2b27Q8R1E9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scgb2b27Q8R1E9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scgb2b27Q8R1E9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.13■□□□□ 0.97
Scgb2b27Q8R1E9 Gm24970-201ENSMUST00000175582 82 ntBASIC21.12■□□□□ 0.97
Scgb2b27Q8R1E9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scgb2b27Q8R1E9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scgb2b27Q8R1E9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scgb2b27Q8R1E9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.11■□□□□ 0.97
Scgb2b27Q8R1E9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Scgb2b27Q8R1E9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scgb2b27Q8R1E9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scgb2b27Q8R1E9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scgb2b27Q8R1E9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Scgb2b27Q8R1E9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scgb2b27Q8R1E9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scgb2b27Q8R1E9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms