Protein–RNA interactions for Protein: Q8K4I3

Arhgef6, Rho guanine nucleotide exchange factor 6, mousemouse

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef6Q8K4I3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Arhgef6Q8K4I3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
Arhgef6Q8K4I3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
Arhgef6Q8K4I3 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.04■■■□□ 2.24
Arhgef6Q8K4I3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Arhgef6Q8K4I3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Arhgef6Q8K4I3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Arhgef6Q8K4I3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.02■■■□□ 2.24
Arhgef6Q8K4I3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Arhgef6Q8K4I3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Arhgef6Q8K4I3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Arhgef6Q8K4I3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Arhgef6Q8K4I3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Arhgef6Q8K4I3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.96■■■□□ 2.23
Arhgef6Q8K4I3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.95■■■□□ 2.22
Arhgef6Q8K4I3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Arhgef6Q8K4I3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Arhgef6Q8K4I3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Arhgef6Q8K4I3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.91■■■□□ 2.22
Arhgef6Q8K4I3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Arhgef6Q8K4I3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
Arhgef6Q8K4I3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Arhgef6Q8K4I3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Arhgef6Q8K4I3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Arhgef6Q8K4I3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Arhgef6Q8K4I3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Arhgef6Q8K4I3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Arhgef6Q8K4I3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Arhgef6Q8K4I3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.87■■■□□ 2.21
Arhgef6Q8K4I3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Arhgef6Q8K4I3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Arhgef6Q8K4I3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Arhgef6Q8K4I3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Arhgef6Q8K4I3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.84■■■□□ 2.21
Arhgef6Q8K4I3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Arhgef6Q8K4I3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Arhgef6Q8K4I3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Arhgef6Q8K4I3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Arhgef6Q8K4I3 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.81■■■□□ 2.2
Arhgef6Q8K4I3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Arhgef6Q8K4I3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Arhgef6Q8K4I3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Arhgef6Q8K4I3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.79■■■□□ 2.2
Arhgef6Q8K4I3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.79■■■□□ 2.2
Arhgef6Q8K4I3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Arhgef6Q8K4I3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
Arhgef6Q8K4I3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Arhgef6Q8K4I3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Arhgef6Q8K4I3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Arhgef6Q8K4I3 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.73■■■□□ 2.19
Arhgef6Q8K4I3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
Arhgef6Q8K4I3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Arhgef6Q8K4I3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Arhgef6Q8K4I3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.71■■■□□ 2.19
Arhgef6Q8K4I3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Arhgef6Q8K4I3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
Arhgef6Q8K4I3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Arhgef6Q8K4I3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Arhgef6Q8K4I3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Arhgef6Q8K4I3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Arhgef6Q8K4I3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.66■■■□□ 2.18
Arhgef6Q8K4I3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.65■■■□□ 2.18
Arhgef6Q8K4I3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Arhgef6Q8K4I3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Arhgef6Q8K4I3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Arhgef6Q8K4I3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Arhgef6Q8K4I3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
Arhgef6Q8K4I3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Arhgef6Q8K4I3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Arhgef6Q8K4I3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Arhgef6Q8K4I3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Arhgef6Q8K4I3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.6■■■□□ 2.17
Arhgef6Q8K4I3 Gm8503-201ENSMUST00000118131 455 ntBASIC28.58■■■□□ 2.17
Arhgef6Q8K4I3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.57■■■□□ 2.16
Arhgef6Q8K4I3 Gm6821-201ENSMUST00000107540 542 ntBASIC28.55■■■□□ 2.16
Arhgef6Q8K4I3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
Arhgef6Q8K4I3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Arhgef6Q8K4I3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Arhgef6Q8K4I3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Arhgef6Q8K4I3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.54■■■□□ 2.16
Arhgef6Q8K4I3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Arhgef6Q8K4I3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Arhgef6Q8K4I3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Arhgef6Q8K4I3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Arhgef6Q8K4I3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Arhgef6Q8K4I3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Arhgef6Q8K4I3 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.5■■■□□ 2.15
Arhgef6Q8K4I3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.49■■■□□ 2.15
Arhgef6Q8K4I3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Arhgef6Q8K4I3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Arhgef6Q8K4I3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Arhgef6Q8K4I3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Arhgef6Q8K4I3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Arhgef6Q8K4I3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.46■■■□□ 2.15
Arhgef6Q8K4I3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Arhgef6Q8K4I3 Nkain2-201ENSMUST00000092602 558 ntBASIC28.46■■■□□ 2.15
Arhgef6Q8K4I3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Arhgef6Q8K4I3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Arhgef6Q8K4I3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Arhgef6Q8K4I3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms