Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.81■□□□□ 0.92
Vrk3Q8K3G5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vrk3Q8K3G5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vrk3Q8K3G5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vrk3Q8K3G5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vrk3Q8K3G5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vrk3Q8K3G5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vrk3Q8K3G5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.79■□□□□ 0.92
Vrk3Q8K3G5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Vrk3Q8K3G5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vrk3Q8K3G5 Gm16148-201ENSMUST00000119653 893 ntBASIC20.77■□□□□ 0.92
Vrk3Q8K3G5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Vrk3Q8K3G5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Vrk3Q8K3G5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vrk3Q8K3G5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.76■□□□□ 0.91
Vrk3Q8K3G5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vrk3Q8K3G5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vrk3Q8K3G5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vrk3Q8K3G5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Vrk3Q8K3G5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vrk3Q8K3G5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Vrk3Q8K3G5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vrk3Q8K3G5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.71■□□□□ 0.91
Vrk3Q8K3G5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vrk3Q8K3G5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vrk3Q8K3G5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vrk3Q8K3G5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Vrk3Q8K3G5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Vrk3Q8K3G5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.68■□□□□ 0.9
Vrk3Q8K3G5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.67■□□□□ 0.9
Vrk3Q8K3G5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vrk3Q8K3G5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vrk3Q8K3G5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vrk3Q8K3G5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vrk3Q8K3G5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vrk3Q8K3G5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vrk3Q8K3G5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vrk3Q8K3G5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vrk3Q8K3G5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Vrk3Q8K3G5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Vrk3Q8K3G5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vrk3Q8K3G5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Vrk3Q8K3G5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Vrk3Q8K3G5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vrk3Q8K3G5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vrk3Q8K3G5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.62■□□□□ 0.89
Vrk3Q8K3G5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vrk3Q8K3G5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vrk3Q8K3G5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vrk3Q8K3G5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Vrk3Q8K3G5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vrk3Q8K3G5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.6■□□□□ 0.89
Vrk3Q8K3G5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vrk3Q8K3G5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vrk3Q8K3G5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vrk3Q8K3G5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.58■□□□□ 0.88
Vrk3Q8K3G5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vrk3Q8K3G5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vrk3Q8K3G5 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.57■□□□□ 0.88
Vrk3Q8K3G5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vrk3Q8K3G5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vrk3Q8K3G5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vrk3Q8K3G5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vrk3Q8K3G5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vrk3Q8K3G5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vrk3Q8K3G5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Vrk3Q8K3G5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vrk3Q8K3G5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vrk3Q8K3G5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vrk3Q8K3G5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vrk3Q8K3G5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vrk3Q8K3G5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vrk3Q8K3G5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vrk3Q8K3G5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vrk3Q8K3G5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vrk3Q8K3G5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vrk3Q8K3G5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vrk3Q8K3G5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vrk3Q8K3G5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vrk3Q8K3G5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vrk3Q8K3G5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Vrk3Q8K3G5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Vrk3Q8K3G5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vrk3Q8K3G5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Vrk3Q8K3G5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vrk3Q8K3G5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.47■□□□□ 0.87
Vrk3Q8K3G5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vrk3Q8K3G5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vrk3Q8K3G5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk3Q8K3G5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk3Q8K3G5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk3Q8K3G5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.46■□□□□ 0.87
Vrk3Q8K3G5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vrk3Q8K3G5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Vrk3Q8K3G5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vrk3Q8K3G5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vrk3Q8K3G5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vrk3Q8K3G5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vrk3Q8K3G5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vrk3Q8K3G5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms