Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm45855-201ENSMUST00000212546 880 ntBASIC23.14■■□□□ 1.29
Rfwd3Q8CIK8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rfwd3Q8CIK8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rfwd3Q8CIK8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rfwd3Q8CIK8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rfwd3Q8CIK8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.12■■□□□ 1.29
Rfwd3Q8CIK8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rfwd3Q8CIK8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rfwd3Q8CIK8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rfwd3Q8CIK8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rfwd3Q8CIK8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rfwd3Q8CIK8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.1■■□□□ 1.29
Rfwd3Q8CIK8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rfwd3Q8CIK8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rfwd3Q8CIK8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.09■■□□□ 1.29
Rfwd3Q8CIK8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rfwd3Q8CIK8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Rfwd3Q8CIK8 Gm24970-201ENSMUST00000175582 82 ntBASIC23.07■■□□□ 1.28
Rfwd3Q8CIK8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.07■■□□□ 1.28
Rfwd3Q8CIK8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rfwd3Q8CIK8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rfwd3Q8CIK8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rfwd3Q8CIK8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.06■■□□□ 1.28
Rfwd3Q8CIK8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfwd3Q8CIK8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rfwd3Q8CIK8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rfwd3Q8CIK8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rfwd3Q8CIK8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Rfwd3Q8CIK8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rfwd3Q8CIK8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rfwd3Q8CIK8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Rfwd3Q8CIK8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rfwd3Q8CIK8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rfwd3Q8CIK8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rfwd3Q8CIK8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rfwd3Q8CIK8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rfwd3Q8CIK8 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.01■■□□□ 1.27
Rfwd3Q8CIK8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rfwd3Q8CIK8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rfwd3Q8CIK8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rfwd3Q8CIK8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.99■■□□□ 1.27
Rfwd3Q8CIK8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rfwd3Q8CIK8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rfwd3Q8CIK8 Zxda-201ENSMUST00000117281 2621 ntBASIC22.98■■□□□ 1.27
Rfwd3Q8CIK8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rfwd3Q8CIK8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rfwd3Q8CIK8 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.97■■□□□ 1.27
Rfwd3Q8CIK8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Rfwd3Q8CIK8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.96■■□□□ 1.27
Rfwd3Q8CIK8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rfwd3Q8CIK8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rfwd3Q8CIK8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Rfwd3Q8CIK8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Rfwd3Q8CIK8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rfwd3Q8CIK8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rfwd3Q8CIK8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
Rfwd3Q8CIK8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rfwd3Q8CIK8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.92■■□□□ 1.26
Rfwd3Q8CIK8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rfwd3Q8CIK8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Rfwd3Q8CIK8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
Rfwd3Q8CIK8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rfwd3Q8CIK8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rfwd3Q8CIK8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rfwd3Q8CIK8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Rfwd3Q8CIK8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Rfwd3Q8CIK8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.89■■□□□ 1.25
Rfwd3Q8CIK8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.89■■□□□ 1.25
Rfwd3Q8CIK8 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.89■■□□□ 1.25
Rfwd3Q8CIK8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rfwd3Q8CIK8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rfwd3Q8CIK8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rfwd3Q8CIK8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rfwd3Q8CIK8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Rfwd3Q8CIK8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Rfwd3Q8CIK8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rfwd3Q8CIK8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.83■■□□□ 1.25
Rfwd3Q8CIK8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rfwd3Q8CIK8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Rfwd3Q8CIK8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.82■■□□□ 1.24
Rfwd3Q8CIK8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.82■■□□□ 1.24
Rfwd3Q8CIK8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rfwd3Q8CIK8 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.81■■□□□ 1.24
Rfwd3Q8CIK8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rfwd3Q8CIK8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rfwd3Q8CIK8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.81■■□□□ 1.24
Rfwd3Q8CIK8 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.81■■□□□ 1.24
Rfwd3Q8CIK8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.81■■□□□ 1.24
Rfwd3Q8CIK8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rfwd3Q8CIK8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rfwd3Q8CIK8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rfwd3Q8CIK8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Rfwd3Q8CIK8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rfwd3Q8CIK8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rfwd3Q8CIK8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rfwd3Q8CIK8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.75■■□□□ 1.23
Rfwd3Q8CIK8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.74■■□□□ 1.23
Rfwd3Q8CIK8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rfwd3Q8CIK8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rfwd3Q8CIK8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms