Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Rbm28Q8CGC6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rbm28Q8CGC6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rbm28Q8CGC6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Rbm28Q8CGC6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Rbm28Q8CGC6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
Rbm28Q8CGC6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.35■■■□□ 2.29
Rbm28Q8CGC6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.34■■■□□ 2.29
Rbm28Q8CGC6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Rbm28Q8CGC6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.33■■■□□ 2.29
Rbm28Q8CGC6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Rbm28Q8CGC6 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.32■■■□□ 2.28
Rbm28Q8CGC6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.32■■■□□ 2.28
Rbm28Q8CGC6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.32■■■□□ 2.28
Rbm28Q8CGC6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rbm28Q8CGC6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.31■■■□□ 2.28
Rbm28Q8CGC6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Rbm28Q8CGC6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Rbm28Q8CGC6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rbm28Q8CGC6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rbm28Q8CGC6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Rbm28Q8CGC6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.27■■■□□ 2.28
Rbm28Q8CGC6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.26■■■□□ 2.28
Rbm28Q8CGC6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
Rbm28Q8CGC6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Rbm28Q8CGC6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Rbm28Q8CGC6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Rbm28Q8CGC6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rbm28Q8CGC6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rbm28Q8CGC6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
Rbm28Q8CGC6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Rbm28Q8CGC6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rbm28Q8CGC6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rbm28Q8CGC6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Rbm28Q8CGC6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
Rbm28Q8CGC6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rbm28Q8CGC6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Rbm28Q8CGC6 Gm8503-201ENSMUST00000118131 455 ntBASIC29.18■■■□□ 2.26
Rbm28Q8CGC6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rbm28Q8CGC6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
Rbm28Q8CGC6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Rbm28Q8CGC6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Rbm28Q8CGC6 Gm6821-201ENSMUST00000107540 542 ntBASIC29.15■■■□□ 2.26
Rbm28Q8CGC6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Rbm28Q8CGC6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Rbm28Q8CGC6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Rbm28Q8CGC6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Rbm28Q8CGC6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Rbm28Q8CGC6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Rbm28Q8CGC6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.11■■■□□ 2.25
Rbm28Q8CGC6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rbm28Q8CGC6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.1■■■□□ 2.25
Rbm28Q8CGC6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Rbm28Q8CGC6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
Rbm28Q8CGC6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.08■■■□□ 2.25
Rbm28Q8CGC6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Rbm28Q8CGC6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rbm28Q8CGC6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rbm28Q8CGC6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Rbm28Q8CGC6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Rbm28Q8CGC6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Rbm28Q8CGC6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Rbm28Q8CGC6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Rbm28Q8CGC6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
Rbm28Q8CGC6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
Rbm28Q8CGC6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.02■■■□□ 2.24
Rbm28Q8CGC6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
Rbm28Q8CGC6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
Rbm28Q8CGC6 Gm6345-201ENSMUST00000180378 1691 ntBASIC29■■■□□ 2.23
Rbm28Q8CGC6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29■■■□□ 2.23
Rbm28Q8CGC6 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.99■■■□□ 2.23
Rbm28Q8CGC6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rbm28Q8CGC6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rbm28Q8CGC6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rbm28Q8CGC6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rbm28Q8CGC6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Rbm28Q8CGC6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rbm28Q8CGC6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rbm28Q8CGC6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rbm28Q8CGC6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.97■■■□□ 2.23
Rbm28Q8CGC6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rbm28Q8CGC6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.95■■■□□ 2.23
Rbm28Q8CGC6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
Rbm28Q8CGC6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rbm28Q8CGC6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Rbm28Q8CGC6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rbm28Q8CGC6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Rbm28Q8CGC6 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.92■■■□□ 2.22
Rbm28Q8CGC6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Rbm28Q8CGC6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Rbm28Q8CGC6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Rbm28Q8CGC6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
Rbm28Q8CGC6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Rbm28Q8CGC6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Rbm28Q8CGC6 Nkain2-201ENSMUST00000092602 558 ntBASIC28.87■■■□□ 2.21
Rbm28Q8CGC6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Rbm28Q8CGC6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Rbm28Q8CGC6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.84■■■□□ 2.21
Rbm28Q8CGC6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.84■■■□□ 2.21
Rbm28Q8CGC6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms