Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.15■■■□□ 2.26
Rtp1Q8C8C1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Rtp1Q8C8C1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC29.14■■■□□ 2.26
Rtp1Q8C8C1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
Rtp1Q8C8C1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.13■■■□□ 2.25
Rtp1Q8C8C1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Rtp1Q8C8C1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Rtp1Q8C8C1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Rtp1Q8C8C1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rtp1Q8C8C1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rtp1Q8C8C1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Rtp1Q8C8C1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Rtp1Q8C8C1 Gm11599-201ENSMUST00000118720 878 ntBASIC29.09■■■□□ 2.25
Rtp1Q8C8C1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.09■■■□□ 2.25
Rtp1Q8C8C1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Rtp1Q8C8C1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
Rtp1Q8C8C1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.08■■■□□ 2.25
Rtp1Q8C8C1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Rtp1Q8C8C1 Mir6538-201ENSMUST00000183713 110 ntBASIC29.06■■■□□ 2.24
Rtp1Q8C8C1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Rtp1Q8C8C1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.05■■■□□ 2.24
Rtp1Q8C8C1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Rtp1Q8C8C1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Rtp1Q8C8C1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Rtp1Q8C8C1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Rtp1Q8C8C1 Gm11175-201ENSMUST00000116172 543 ntBASIC29.03■■■□□ 2.24
Rtp1Q8C8C1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Rtp1Q8C8C1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Rtp1Q8C8C1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Rtp1Q8C8C1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29■■■□□ 2.23
Rtp1Q8C8C1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.99■■■□□ 2.23
Rtp1Q8C8C1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rtp1Q8C8C1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Rtp1Q8C8C1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rtp1Q8C8C1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Rtp1Q8C8C1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Rtp1Q8C8C1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Rtp1Q8C8C1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rtp1Q8C8C1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rtp1Q8C8C1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Rtp1Q8C8C1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Rtp1Q8C8C1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.95■■■□□ 2.23
Rtp1Q8C8C1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rtp1Q8C8C1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
Rtp1Q8C8C1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.93■■■□□ 2.22
Rtp1Q8C8C1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Rtp1Q8C8C1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Rtp1Q8C8C1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Rtp1Q8C8C1 Cap2-205ENSMUST00000225824 1634 ntBASIC28.91■■■□□ 2.22
Rtp1Q8C8C1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.91■■■□□ 2.22
Rtp1Q8C8C1 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.89■■■□□ 2.22
Rtp1Q8C8C1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.89■■■□□ 2.21
Rtp1Q8C8C1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.88■■■□□ 2.21
Rtp1Q8C8C1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
Rtp1Q8C8C1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.86■■■□□ 2.21
Rtp1Q8C8C1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Rtp1Q8C8C1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Rtp1Q8C8C1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rtp1Q8C8C1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rtp1Q8C8C1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Rtp1Q8C8C1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rtp1Q8C8C1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
Rtp1Q8C8C1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.81■■■□□ 2.2
Rtp1Q8C8C1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rtp1Q8C8C1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rtp1Q8C8C1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.78■■■□□ 2.2
Rtp1Q8C8C1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.78■■■□□ 2.2
Rtp1Q8C8C1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rtp1Q8C8C1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Rtp1Q8C8C1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rtp1Q8C8C1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Rtp1Q8C8C1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.75■■■□□ 2.19
Rtp1Q8C8C1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Rtp1Q8C8C1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rtp1Q8C8C1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.74■■■□□ 2.19
Rtp1Q8C8C1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rtp1Q8C8C1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Rtp1Q8C8C1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Rtp1Q8C8C1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.73■■■□□ 2.19
Rtp1Q8C8C1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Rtp1Q8C8C1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rtp1Q8C8C1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Rtp1Q8C8C1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Rtp1Q8C8C1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.69■■■□□ 2.18
Rtp1Q8C8C1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rtp1Q8C8C1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.68■■■□□ 2.18
Rtp1Q8C8C1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
Rtp1Q8C8C1 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.67■■■□□ 2.18
Rtp1Q8C8C1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Rtp1Q8C8C1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rtp1Q8C8C1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rtp1Q8C8C1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rtp1Q8C8C1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Rtp1Q8C8C1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rtp1Q8C8C1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rtp1Q8C8C1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rtp1Q8C8C1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rtp1Q8C8C1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Rtp1Q8C8C1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Rtp1Q8C8C1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.59■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms