Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cfap54Q8C6S9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Cfap54Q8C6S9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cfap54Q8C6S9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.61■■□□□ 1.53
Cfap54Q8C6S9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cfap54Q8C6S9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Cfap54Q8C6S9 Gm11175-201ENSMUST00000116172 543 ntBASIC24.6■■□□□ 1.53
Cfap54Q8C6S9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Cfap54Q8C6S9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cfap54Q8C6S9 Gm11599-201ENSMUST00000118720 878 ntBASIC24.59■■□□□ 1.53
Cfap54Q8C6S9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cfap54Q8C6S9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cfap54Q8C6S9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cfap54Q8C6S9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cfap54Q8C6S9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cfap54Q8C6S9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.55■■□□□ 1.52
Cfap54Q8C6S9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Cfap54Q8C6S9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cfap54Q8C6S9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cfap54Q8C6S9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
Cfap54Q8C6S9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cfap54Q8C6S9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cfap54Q8C6S9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cfap54Q8C6S9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.52■■□□□ 1.52
Cfap54Q8C6S9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cfap54Q8C6S9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cfap54Q8C6S9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cfap54Q8C6S9 Cap2-205ENSMUST00000225824 1634 ntBASIC24.51■■□□□ 1.51
Cfap54Q8C6S9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Cfap54Q8C6S9 Nkain2-201ENSMUST00000092602 558 ntBASIC24.48■■□□□ 1.51
Cfap54Q8C6S9 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.47■■□□□ 1.51
Cfap54Q8C6S9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cfap54Q8C6S9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.47■■□□□ 1.51
Cfap54Q8C6S9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cfap54Q8C6S9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Cfap54Q8C6S9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cfap54Q8C6S9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.45■■□□□ 1.5
Cfap54Q8C6S9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cfap54Q8C6S9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cfap54Q8C6S9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Cfap54Q8C6S9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cfap54Q8C6S9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cfap54Q8C6S9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Cfap54Q8C6S9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cfap54Q8C6S9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cfap54Q8C6S9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cfap54Q8C6S9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.4■■□□□ 1.5
Cfap54Q8C6S9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cfap54Q8C6S9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cfap54Q8C6S9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cfap54Q8C6S9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cfap54Q8C6S9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cfap54Q8C6S9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Cfap54Q8C6S9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cfap54Q8C6S9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
Cfap54Q8C6S9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.35■■□□□ 1.49
Cfap54Q8C6S9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
Cfap54Q8C6S9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cfap54Q8C6S9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cfap54Q8C6S9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cfap54Q8C6S9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.32■■□□□ 1.48
Cfap54Q8C6S9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Cfap54Q8C6S9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.3■■□□□ 1.48
Cfap54Q8C6S9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Cfap54Q8C6S9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cfap54Q8C6S9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Cfap54Q8C6S9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Cfap54Q8C6S9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cfap54Q8C6S9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cfap54Q8C6S9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cfap54Q8C6S9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cfap54Q8C6S9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Cfap54Q8C6S9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cfap54Q8C6S9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Cfap54Q8C6S9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Cfap54Q8C6S9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.24■■□□□ 1.47
Cfap54Q8C6S9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cfap54Q8C6S9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cfap54Q8C6S9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.21■■□□□ 1.47
Cfap54Q8C6S9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cfap54Q8C6S9 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.2■■□□□ 1.46
Cfap54Q8C6S9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cfap54Q8C6S9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cfap54Q8C6S9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.19■■□□□ 1.46
Cfap54Q8C6S9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cfap54Q8C6S9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.17■■□□□ 1.46
Cfap54Q8C6S9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cfap54Q8C6S9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.16■■□□□ 1.46
Cfap54Q8C6S9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.15■■□□□ 1.46
Cfap54Q8C6S9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Cfap54Q8C6S9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.14■■□□□ 1.45
Cfap54Q8C6S9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cfap54Q8C6S9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cfap54Q8C6S9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Cfap54Q8C6S9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cfap54Q8C6S9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.12■■□□□ 1.45
Cfap54Q8C6S9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cfap54Q8C6S9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap54Q8C6S9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap54Q8C6S9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms