Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cpne1Q8C166 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.12■■□□□ 1.29
Cpne1Q8C166 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cpne1Q8C166 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Cpne1Q8C166 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Cpne1Q8C166 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.08■■□□□ 1.29
Cpne1Q8C166 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cpne1Q8C166 Gm9397-201ENSMUST00000200125 605 ntBASIC23.07■■□□□ 1.28
Cpne1Q8C166 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
Cpne1Q8C166 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cpne1Q8C166 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cpne1Q8C166 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cpne1Q8C166 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cpne1Q8C166 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cpne1Q8C166 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Cpne1Q8C166 Gm45855-201ENSMUST00000212546 880 ntBASIC23.05■■□□□ 1.28
Cpne1Q8C166 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cpne1Q8C166 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cpne1Q8C166 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cpne1Q8C166 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cpne1Q8C166 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.04■■□□□ 1.28
Cpne1Q8C166 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.04■■□□□ 1.28
Cpne1Q8C166 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cpne1Q8C166 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cpne1Q8C166 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cpne1Q8C166 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.02■■□□□ 1.28
Cpne1Q8C166 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.02■■□□□ 1.28
Cpne1Q8C166 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cpne1Q8C166 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cpne1Q8C166 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.01■■□□□ 1.27
Cpne1Q8C166 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cpne1Q8C166 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cpne1Q8C166 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cpne1Q8C166 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cpne1Q8C166 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cpne1Q8C166 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.96■■□□□ 1.27
Cpne1Q8C166 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cpne1Q8C166 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cpne1Q8C166 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cpne1Q8C166 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cpne1Q8C166 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cpne1Q8C166 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cpne1Q8C166 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cpne1Q8C166 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cpne1Q8C166 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.93■■□□□ 1.26
Cpne1Q8C166 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.92■■□□□ 1.26
Cpne1Q8C166 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cpne1Q8C166 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cpne1Q8C166 Gm24970-201ENSMUST00000175582 82 ntBASIC22.91■■□□□ 1.26
Cpne1Q8C166 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cpne1Q8C166 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Cpne1Q8C166 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.9■■□□□ 1.26
Cpne1Q8C166 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Cpne1Q8C166 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cpne1Q8C166 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cpne1Q8C166 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cpne1Q8C166 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cpne1Q8C166 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cpne1Q8C166 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
Cpne1Q8C166 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cpne1Q8C166 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cpne1Q8C166 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
Cpne1Q8C166 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cpne1Q8C166 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.86■■□□□ 1.25
Cpne1Q8C166 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cpne1Q8C166 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
Cpne1Q8C166 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.85■■□□□ 1.25
Cpne1Q8C166 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Cpne1Q8C166 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cpne1Q8C166 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Cpne1Q8C166 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.83■■□□□ 1.25
Cpne1Q8C166 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cpne1Q8C166 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.82■■□□□ 1.24
Cpne1Q8C166 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.82■■□□□ 1.24
Cpne1Q8C166 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.82■■□□□ 1.24
Cpne1Q8C166 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cpne1Q8C166 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cpne1Q8C166 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.81■■□□□ 1.24
Cpne1Q8C166 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cpne1Q8C166 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.81■■□□□ 1.24
Cpne1Q8C166 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cpne1Q8C166 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Cpne1Q8C166 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cpne1Q8C166 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cpne1Q8C166 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.79■■□□□ 1.24
Cpne1Q8C166 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cpne1Q8C166 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cpne1Q8C166 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cpne1Q8C166 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.78■■□□□ 1.24
Cpne1Q8C166 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cpne1Q8C166 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cpne1Q8C166 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cpne1Q8C166 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.75■■□□□ 1.23
Cpne1Q8C166 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Cpne1Q8C166 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.73■■□□□ 1.23
Cpne1Q8C166 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cpne1Q8C166 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
Cpne1Q8C166 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cpne1Q8C166 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cpne1Q8C166 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms