Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.3■□□□□ 0.84
Chd9Q8BYH8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chd9Q8BYH8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd9Q8BYH8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd9Q8BYH8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chd9Q8BYH8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd9Q8BYH8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.28■□□□□ 0.84
Chd9Q8BYH8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chd9Q8BYH8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.27■□□□□ 0.84
Chd9Q8BYH8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd9Q8BYH8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chd9Q8BYH8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Chd9Q8BYH8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd9Q8BYH8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Chd9Q8BYH8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chd9Q8BYH8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.23■□□□□ 0.83
Chd9Q8BYH8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd9Q8BYH8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd9Q8BYH8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd9Q8BYH8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd9Q8BYH8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.22■□□□□ 0.83
Chd9Q8BYH8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Chd9Q8BYH8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd9Q8BYH8 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.19■□□□□ 0.82
Chd9Q8BYH8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd9Q8BYH8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd9Q8BYH8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Chd9Q8BYH8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Chd9Q8BYH8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd9Q8BYH8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Chd9Q8BYH8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.15■□□□□ 0.82
Chd9Q8BYH8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd9Q8BYH8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chd9Q8BYH8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd9Q8BYH8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chd9Q8BYH8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd9Q8BYH8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd9Q8BYH8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd9Q8BYH8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chd9Q8BYH8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd9Q8BYH8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chd9Q8BYH8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Chd9Q8BYH8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd9Q8BYH8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.1■□□□□ 0.81
Chd9Q8BYH8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd9Q8BYH8 Nkain2-201ENSMUST00000092602 558 ntBASIC20.09■□□□□ 0.81
Chd9Q8BYH8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Chd9Q8BYH8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd9Q8BYH8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd9Q8BYH8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd9Q8BYH8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd9Q8BYH8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd9Q8BYH8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Chd9Q8BYH8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Chd9Q8BYH8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd9Q8BYH8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd9Q8BYH8 Gm5812-201ENSMUST00000061073 957 ntBASIC20.04■□□□□ 0.8
Chd9Q8BYH8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd9Q8BYH8 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.03■□□□□ 0.8
Chd9Q8BYH8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Chd9Q8BYH8 Gm6311-201ENSMUST00000073790 878 ntBASIC20.02■□□□□ 0.8
Chd9Q8BYH8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd9Q8BYH8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd9Q8BYH8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chd9Q8BYH8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd9Q8BYH8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Chd9Q8BYH8 Serp2-204ENSMUST00000228055 705 ntBASIC19.97■□□□□ 0.79
Chd9Q8BYH8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd9Q8BYH8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chd9Q8BYH8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chd9Q8BYH8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.93■□□□□ 0.78
Chd9Q8BYH8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Chd9Q8BYH8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd9Q8BYH8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Chd9Q8BYH8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.93■□□□□ 0.78
Chd9Q8BYH8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd9Q8BYH8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd9Q8BYH8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd9Q8BYH8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd9Q8BYH8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.9■□□□□ 0.78
Chd9Q8BYH8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Chd9Q8BYH8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chd9Q8BYH8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd9Q8BYH8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.89■□□□□ 0.77
Chd9Q8BYH8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd9Q8BYH8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd9Q8BYH8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd9Q8BYH8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd9Q8BYH8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.87■□□□□ 0.77
Chd9Q8BYH8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Chd9Q8BYH8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.86■□□□□ 0.77
Chd9Q8BYH8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd9Q8BYH8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
Chd9Q8BYH8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms