Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm16148-201ENSMUST00000119653 893 ntBASIC23.71■■□□□ 1.39
Cpne3Q8BT60 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cpne3Q8BT60 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cpne3Q8BT60 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cpne3Q8BT60 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cpne3Q8BT60 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
Cpne3Q8BT60 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.68■■□□□ 1.38
Cpne3Q8BT60 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.68■■□□□ 1.38
Cpne3Q8BT60 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.65■■□□□ 1.38
Cpne3Q8BT60 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpne3Q8BT60 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpne3Q8BT60 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Cpne3Q8BT60 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpne3Q8BT60 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpne3Q8BT60 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cpne3Q8BT60 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpne3Q8BT60 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Cpne3Q8BT60 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cpne3Q8BT60 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpne3Q8BT60 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpne3Q8BT60 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpne3Q8BT60 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cpne3Q8BT60 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cpne3Q8BT60 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
Cpne3Q8BT60 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpne3Q8BT60 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpne3Q8BT60 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Cpne3Q8BT60 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.58■■□□□ 1.37
Cpne3Q8BT60 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cpne3Q8BT60 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Cpne3Q8BT60 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cpne3Q8BT60 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cpne3Q8BT60 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cpne3Q8BT60 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cpne3Q8BT60 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpne3Q8BT60 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpne3Q8BT60 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpne3Q8BT60 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpne3Q8BT60 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cpne3Q8BT60 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Cpne3Q8BT60 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Cpne3Q8BT60 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Cpne3Q8BT60 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Cpne3Q8BT60 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cpne3Q8BT60 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Cpne3Q8BT60 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Cpne3Q8BT60 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpne3Q8BT60 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.51■■□□□ 1.35
Cpne3Q8BT60 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpne3Q8BT60 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cpne3Q8BT60 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.5■■□□□ 1.35
Cpne3Q8BT60 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Cpne3Q8BT60 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
Cpne3Q8BT60 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpne3Q8BT60 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpne3Q8BT60 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpne3Q8BT60 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.49■■□□□ 1.35
Cpne3Q8BT60 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Cpne3Q8BT60 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Cpne3Q8BT60 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Cpne3Q8BT60 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cpne3Q8BT60 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cpne3Q8BT60 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cpne3Q8BT60 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cpne3Q8BT60 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cpne3Q8BT60 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cpne3Q8BT60 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cpne3Q8BT60 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.43■■□□□ 1.34
Cpne3Q8BT60 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cpne3Q8BT60 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.42■■□□□ 1.34
Cpne3Q8BT60 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cpne3Q8BT60 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Cpne3Q8BT60 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Cpne3Q8BT60 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Cpne3Q8BT60 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cpne3Q8BT60 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Cpne3Q8BT60 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
Cpne3Q8BT60 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Cpne3Q8BT60 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cpne3Q8BT60 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.37■■□□□ 1.33
Cpne3Q8BT60 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cpne3Q8BT60 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cpne3Q8BT60 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cpne3Q8BT60 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Cpne3Q8BT60 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cpne3Q8BT60 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cpne3Q8BT60 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cpne3Q8BT60 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cpne3Q8BT60 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.35■■□□□ 1.33
Cpne3Q8BT60 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cpne3Q8BT60 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cpne3Q8BT60 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cpne3Q8BT60 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.34■■□□□ 1.33
Cpne3Q8BT60 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cpne3Q8BT60 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cpne3Q8BT60 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cpne3Q8BT60 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.32■■□□□ 1.32
Cpne3Q8BT60 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cpne3Q8BT60 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cpne3Q8BT60 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms