Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cpsf4Q8BQZ5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf4Q8BQZ5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cpsf4Q8BQZ5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf4Q8BQZ5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf4Q8BQZ5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf4Q8BQZ5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cpsf4Q8BQZ5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cpsf4Q8BQZ5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf4Q8BQZ5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cpsf4Q8BQZ5 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.75■■□□□ 1.39
Cpsf4Q8BQZ5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cpsf4Q8BQZ5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Cpsf4Q8BQZ5 Amer2-203ENSMUST00000225247 2662 ntBASIC23.73■■□□□ 1.39
Cpsf4Q8BQZ5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
Cpsf4Q8BQZ5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cpsf4Q8BQZ5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Cpsf4Q8BQZ5 Gm45855-201ENSMUST00000212546 880 ntBASIC23.7■■□□□ 1.38
Cpsf4Q8BQZ5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cpsf4Q8BQZ5 Gm9397-201ENSMUST00000200125 605 ntBASIC23.69■■□□□ 1.38
Cpsf4Q8BQZ5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cpsf4Q8BQZ5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cpsf4Q8BQZ5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cpsf4Q8BQZ5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Cpsf4Q8BQZ5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.67■■□□□ 1.38
Cpsf4Q8BQZ5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.67■■□□□ 1.38
Cpsf4Q8BQZ5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.67■■□□□ 1.38
Cpsf4Q8BQZ5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cpsf4Q8BQZ5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.66■■□□□ 1.38
Cpsf4Q8BQZ5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cpsf4Q8BQZ5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cpsf4Q8BQZ5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cpsf4Q8BQZ5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cpsf4Q8BQZ5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.65■■□□□ 1.38
Cpsf4Q8BQZ5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.65■■□□□ 1.38
Cpsf4Q8BQZ5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.65■■□□□ 1.38
Cpsf4Q8BQZ5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Cpsf4Q8BQZ5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf4Q8BQZ5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf4Q8BQZ5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf4Q8BQZ5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf4Q8BQZ5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf4Q8BQZ5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.62■■□□□ 1.37
Cpsf4Q8BQZ5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf4Q8BQZ5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf4Q8BQZ5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf4Q8BQZ5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cpsf4Q8BQZ5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cpsf4Q8BQZ5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf4Q8BQZ5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cpsf4Q8BQZ5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.58■■□□□ 1.37
Cpsf4Q8BQZ5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cpsf4Q8BQZ5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.58■■□□□ 1.37
Cpsf4Q8BQZ5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Cpsf4Q8BQZ5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
Cpsf4Q8BQZ5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf4Q8BQZ5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf4Q8BQZ5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf4Q8BQZ5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf4Q8BQZ5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf4Q8BQZ5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cpsf4Q8BQZ5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Cpsf4Q8BQZ5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
Cpsf4Q8BQZ5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cpsf4Q8BQZ5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Cpsf4Q8BQZ5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Cpsf4Q8BQZ5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Cpsf4Q8BQZ5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cpsf4Q8BQZ5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf4Q8BQZ5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cpsf4Q8BQZ5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.5■■□□□ 1.35
Cpsf4Q8BQZ5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
Cpsf4Q8BQZ5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.49■■□□□ 1.35
Cpsf4Q8BQZ5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.49■■□□□ 1.35
Cpsf4Q8BQZ5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Cpsf4Q8BQZ5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cpsf4Q8BQZ5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cpsf4Q8BQZ5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Cpsf4Q8BQZ5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.48■■□□□ 1.35
Cpsf4Q8BQZ5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cpsf4Q8BQZ5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cpsf4Q8BQZ5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cpsf4Q8BQZ5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Cpsf4Q8BQZ5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cpsf4Q8BQZ5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Cpsf4Q8BQZ5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cpsf4Q8BQZ5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.46■■□□□ 1.35
Cpsf4Q8BQZ5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Cpsf4Q8BQZ5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Cpsf4Q8BQZ5 Gm24970-201ENSMUST00000175582 82 ntBASIC23.45■■□□□ 1.34
Cpsf4Q8BQZ5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cpsf4Q8BQZ5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Cpsf4Q8BQZ5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.43■■□□□ 1.34
Cpsf4Q8BQZ5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.43■■□□□ 1.34
Cpsf4Q8BQZ5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cpsf4Q8BQZ5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cpsf4Q8BQZ5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cpsf4Q8BQZ5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Cpsf4Q8BQZ5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cpsf4Q8BQZ5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms