Protein–RNA interactions for Protein: Q8BQJ2

3830417A13Rik, RIKEN cDNA 3830417A13, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3830417A13RikQ8BQJ2 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.11■■■□□ 2.09
3830417A13RikQ8BQJ2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
3830417A13RikQ8BQJ2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
3830417A13RikQ8BQJ2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
3830417A13RikQ8BQJ2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
3830417A13RikQ8BQJ2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
3830417A13RikQ8BQJ2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
3830417A13RikQ8BQJ2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
3830417A13RikQ8BQJ2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
3830417A13RikQ8BQJ2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
3830417A13RikQ8BQJ2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
3830417A13RikQ8BQJ2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
3830417A13RikQ8BQJ2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
3830417A13RikQ8BQJ2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
3830417A13RikQ8BQJ2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
3830417A13RikQ8BQJ2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.99■■■□□ 2.07
3830417A13RikQ8BQJ2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
3830417A13RikQ8BQJ2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
3830417A13RikQ8BQJ2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
3830417A13RikQ8BQJ2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
3830417A13RikQ8BQJ2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
3830417A13RikQ8BQJ2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.94■■■□□ 2.06
3830417A13RikQ8BQJ2 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.93■■■□□ 2.06
3830417A13RikQ8BQJ2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
3830417A13RikQ8BQJ2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
3830417A13RikQ8BQJ2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
3830417A13RikQ8BQJ2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.88■■■□□ 2.05
3830417A13RikQ8BQJ2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
3830417A13RikQ8BQJ2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
3830417A13RikQ8BQJ2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
3830417A13RikQ8BQJ2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
3830417A13RikQ8BQJ2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
3830417A13RikQ8BQJ2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.84■■■□□ 2.05
3830417A13RikQ8BQJ2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.84■■■□□ 2.05
3830417A13RikQ8BQJ2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
3830417A13RikQ8BQJ2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.82■■■□□ 2.04
3830417A13RikQ8BQJ2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
3830417A13RikQ8BQJ2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
3830417A13RikQ8BQJ2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
3830417A13RikQ8BQJ2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
3830417A13RikQ8BQJ2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
3830417A13RikQ8BQJ2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
3830417A13RikQ8BQJ2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.78■■■□□ 2.04
3830417A13RikQ8BQJ2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
3830417A13RikQ8BQJ2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
3830417A13RikQ8BQJ2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
3830417A13RikQ8BQJ2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
3830417A13RikQ8BQJ2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
3830417A13RikQ8BQJ2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
3830417A13RikQ8BQJ2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
3830417A13RikQ8BQJ2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
3830417A13RikQ8BQJ2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
3830417A13RikQ8BQJ2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
3830417A13RikQ8BQJ2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
3830417A13RikQ8BQJ2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
3830417A13RikQ8BQJ2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
3830417A13RikQ8BQJ2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
3830417A13RikQ8BQJ2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
3830417A13RikQ8BQJ2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.68■■■□□ 2.02
3830417A13RikQ8BQJ2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
3830417A13RikQ8BQJ2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
3830417A13RikQ8BQJ2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.67■■■□□ 2.02
3830417A13RikQ8BQJ2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
3830417A13RikQ8BQJ2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
3830417A13RikQ8BQJ2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.67■■■□□ 2.02
3830417A13RikQ8BQJ2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.66■■■□□ 2.02
3830417A13RikQ8BQJ2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
3830417A13RikQ8BQJ2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
3830417A13RikQ8BQJ2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
3830417A13RikQ8BQJ2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
3830417A13RikQ8BQJ2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
3830417A13RikQ8BQJ2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
3830417A13RikQ8BQJ2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
3830417A13RikQ8BQJ2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
3830417A13RikQ8BQJ2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
3830417A13RikQ8BQJ2 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.6■■■□□ 2.01
3830417A13RikQ8BQJ2 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.59■■■□□ 2.01
3830417A13RikQ8BQJ2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.59■■■□□ 2.01
3830417A13RikQ8BQJ2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
3830417A13RikQ8BQJ2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
3830417A13RikQ8BQJ2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
3830417A13RikQ8BQJ2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.57■■■□□ 2
3830417A13RikQ8BQJ2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
3830417A13RikQ8BQJ2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.55■■■□□ 2
3830417A13RikQ8BQJ2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.55■■■□□ 2
3830417A13RikQ8BQJ2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
3830417A13RikQ8BQJ2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
3830417A13RikQ8BQJ2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.53■■■□□ 2
3830417A13RikQ8BQJ2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.53■■■□□ 2
3830417A13RikQ8BQJ2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.52■■■□□ 2
3830417A13RikQ8BQJ2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
3830417A13RikQ8BQJ2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
3830417A13RikQ8BQJ2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
3830417A13RikQ8BQJ2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.48■■□□□ 1.99
3830417A13RikQ8BQJ2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
3830417A13RikQ8BQJ2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
3830417A13RikQ8BQJ2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.46■■□□□ 1.99
3830417A13RikQ8BQJ2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
3830417A13RikQ8BQJ2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
3830417A13RikQ8BQJ2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms