Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Sfr1Q8BP27 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sfr1Q8BP27 Gm24970-201ENSMUST00000175582 82 ntBASIC25.1■■□□□ 1.61
Sfr1Q8BP27 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.1■■□□□ 1.61
Sfr1Q8BP27 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.09■■□□□ 1.61
Sfr1Q8BP27 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
Sfr1Q8BP27 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.09■■□□□ 1.61
Sfr1Q8BP27 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sfr1Q8BP27 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Sfr1Q8BP27 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Sfr1Q8BP27 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Sfr1Q8BP27 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Sfr1Q8BP27 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Sfr1Q8BP27 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sfr1Q8BP27 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sfr1Q8BP27 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sfr1Q8BP27 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sfr1Q8BP27 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.05■■□□□ 1.6
Sfr1Q8BP27 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Sfr1Q8BP27 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sfr1Q8BP27 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sfr1Q8BP27 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.04■■□□□ 1.6
Sfr1Q8BP27 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sfr1Q8BP27 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sfr1Q8BP27 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sfr1Q8BP27 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Sfr1Q8BP27 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
Sfr1Q8BP27 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Sfr1Q8BP27 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sfr1Q8BP27 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sfr1Q8BP27 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sfr1Q8BP27 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sfr1Q8BP27 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Sfr1Q8BP27 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Sfr1Q8BP27 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Sfr1Q8BP27 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Sfr1Q8BP27 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
Sfr1Q8BP27 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sfr1Q8BP27 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.94■■□□□ 1.58
Sfr1Q8BP27 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sfr1Q8BP27 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.93■■□□□ 1.58
Sfr1Q8BP27 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Sfr1Q8BP27 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Sfr1Q8BP27 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Sfr1Q8BP27 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Sfr1Q8BP27 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Sfr1Q8BP27 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.92■■□□□ 1.58
Sfr1Q8BP27 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Sfr1Q8BP27 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Sfr1Q8BP27 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Sfr1Q8BP27 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Sfr1Q8BP27 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.91■■□□□ 1.58
Sfr1Q8BP27 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Sfr1Q8BP27 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.89■■□□□ 1.58
Sfr1Q8BP27 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Sfr1Q8BP27 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Sfr1Q8BP27 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Sfr1Q8BP27 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Sfr1Q8BP27 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sfr1Q8BP27 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Sfr1Q8BP27 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.88■■□□□ 1.57
Sfr1Q8BP27 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
Sfr1Q8BP27 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.87■■□□□ 1.57
Sfr1Q8BP27 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.87■■□□□ 1.57
Sfr1Q8BP27 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Sfr1Q8BP27 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Sfr1Q8BP27 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Sfr1Q8BP27 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sfr1Q8BP27 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sfr1Q8BP27 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Sfr1Q8BP27 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sfr1Q8BP27 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sfr1Q8BP27 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Sfr1Q8BP27 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sfr1Q8BP27 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.78■■□□□ 1.56
Sfr1Q8BP27 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.78■■□□□ 1.56
Sfr1Q8BP27 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Sfr1Q8BP27 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Sfr1Q8BP27 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.76■■□□□ 1.55
Sfr1Q8BP27 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sfr1Q8BP27 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Sfr1Q8BP27 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.75■■□□□ 1.55
Sfr1Q8BP27 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sfr1Q8BP27 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sfr1Q8BP27 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sfr1Q8BP27 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sfr1Q8BP27 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.71■■□□□ 1.55
Sfr1Q8BP27 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sfr1Q8BP27 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Sfr1Q8BP27 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sfr1Q8BP27 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Sfr1Q8BP27 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Sfr1Q8BP27 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Sfr1Q8BP27 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Sfr1Q8BP27 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.7■■□□□ 1.54
Sfr1Q8BP27 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.69■■□□□ 1.54
Sfr1Q8BP27 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.69■■□□□ 1.54
Sfr1Q8BP27 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sfr1Q8BP27 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.69■■□□□ 1.54
Sfr1Q8BP27 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms