Protein–RNA interactions for Protein: Q8BMN3

Chrnb3, Neuronal acetylcholine receptor subunit beta-3, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb3Q8BMN3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Chrnb3Q8BMN3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Chrnb3Q8BMN3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Chrnb3Q8BMN3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.42■■□□□ 1.5
Chrnb3Q8BMN3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.41■■□□□ 1.5
Chrnb3Q8BMN3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Chrnb3Q8BMN3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Chrnb3Q8BMN3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Chrnb3Q8BMN3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Chrnb3Q8BMN3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Chrnb3Q8BMN3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Chrnb3Q8BMN3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chrnb3Q8BMN3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chrnb3Q8BMN3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Chrnb3Q8BMN3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chrnb3Q8BMN3 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.38■■□□□ 1.49
Chrnb3Q8BMN3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Chrnb3Q8BMN3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Chrnb3Q8BMN3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.36■■□□□ 1.49
Chrnb3Q8BMN3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Chrnb3Q8BMN3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Chrnb3Q8BMN3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Chrnb3Q8BMN3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Chrnb3Q8BMN3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Chrnb3Q8BMN3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Chrnb3Q8BMN3 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.33■■□□□ 1.49
Chrnb3Q8BMN3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chrnb3Q8BMN3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Chrnb3Q8BMN3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Chrnb3Q8BMN3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.32■■□□□ 1.48
Chrnb3Q8BMN3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Chrnb3Q8BMN3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Chrnb3Q8BMN3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Chrnb3Q8BMN3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Chrnb3Q8BMN3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Chrnb3Q8BMN3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Chrnb3Q8BMN3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.29■■□□□ 1.48
Chrnb3Q8BMN3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.28■■□□□ 1.48
Chrnb3Q8BMN3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Chrnb3Q8BMN3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Chrnb3Q8BMN3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Chrnb3Q8BMN3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Chrnb3Q8BMN3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Chrnb3Q8BMN3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Chrnb3Q8BMN3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Chrnb3Q8BMN3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.23■■□□□ 1.47
Chrnb3Q8BMN3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Chrnb3Q8BMN3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Chrnb3Q8BMN3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.2■■□□□ 1.46
Chrnb3Q8BMN3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Chrnb3Q8BMN3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Chrnb3Q8BMN3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.16■■□□□ 1.46
Chrnb3Q8BMN3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chrnb3Q8BMN3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Chrnb3Q8BMN3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.15■■□□□ 1.46
Chrnb3Q8BMN3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Chrnb3Q8BMN3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chrnb3Q8BMN3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chrnb3Q8BMN3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Chrnb3Q8BMN3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chrnb3Q8BMN3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chrnb3Q8BMN3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chrnb3Q8BMN3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chrnb3Q8BMN3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chrnb3Q8BMN3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Chrnb3Q8BMN3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.1■■□□□ 1.45
Chrnb3Q8BMN3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Chrnb3Q8BMN3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chrnb3Q8BMN3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
Chrnb3Q8BMN3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
Chrnb3Q8BMN3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chrnb3Q8BMN3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Chrnb3Q8BMN3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Chrnb3Q8BMN3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Chrnb3Q8BMN3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Chrnb3Q8BMN3 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.03■■□□□ 1.44
Chrnb3Q8BMN3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Chrnb3Q8BMN3 Zxda-201ENSMUST00000117281 2621 ntBASIC24.02■■□□□ 1.44
Chrnb3Q8BMN3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Chrnb3Q8BMN3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Chrnb3Q8BMN3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Chrnb3Q8BMN3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24■■□□□ 1.43
Chrnb3Q8BMN3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Chrnb3Q8BMN3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24■■□□□ 1.43
Chrnb3Q8BMN3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.99■■□□□ 1.43
Chrnb3Q8BMN3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Chrnb3Q8BMN3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Chrnb3Q8BMN3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chrnb3Q8BMN3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chrnb3Q8BMN3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Chrnb3Q8BMN3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Chrnb3Q8BMN3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.95■■□□□ 1.42
Chrnb3Q8BMN3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chrnb3Q8BMN3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chrnb3Q8BMN3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Chrnb3Q8BMN3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.92■■□□□ 1.42
Chrnb3Q8BMN3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Chrnb3Q8BMN3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chrnb3Q8BMN3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chrnb3Q8BMN3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms