Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
Cpne4Q8BLR2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cpne4Q8BLR2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.2■■□□□ 1.14
Cpne4Q8BLR2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cpne4Q8BLR2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cpne4Q8BLR2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpne4Q8BLR2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cpne4Q8BLR2 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.18■■□□□ 1.14
Cpne4Q8BLR2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cpne4Q8BLR2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cpne4Q8BLR2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Cpne4Q8BLR2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.15■■□□□ 1.14
Cpne4Q8BLR2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cpne4Q8BLR2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.15■■□□□ 1.14
Cpne4Q8BLR2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cpne4Q8BLR2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.14
Cpne4Q8BLR2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cpne4Q8BLR2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cpne4Q8BLR2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cpne4Q8BLR2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cpne4Q8BLR2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cpne4Q8BLR2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cpne4Q8BLR2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cpne4Q8BLR2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.11■■□□□ 1.13
Cpne4Q8BLR2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.1■■□□□ 1.13
Cpne4Q8BLR2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Cpne4Q8BLR2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpne4Q8BLR2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.09■■□□□ 1.13
Cpne4Q8BLR2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.09■■□□□ 1.13
Cpne4Q8BLR2 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.09■■□□□ 1.13
Cpne4Q8BLR2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.09■■□□□ 1.13
Cpne4Q8BLR2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Cpne4Q8BLR2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cpne4Q8BLR2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cpne4Q8BLR2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cpne4Q8BLR2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cpne4Q8BLR2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Cpne4Q8BLR2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cpne4Q8BLR2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cpne4Q8BLR2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Cpne4Q8BLR2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cpne4Q8BLR2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cpne4Q8BLR2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cpne4Q8BLR2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cpne4Q8BLR2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cpne4Q8BLR2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.03■■□□□ 1.12
Cpne4Q8BLR2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cpne4Q8BLR2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cpne4Q8BLR2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cpne4Q8BLR2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Cpne4Q8BLR2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cpne4Q8BLR2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
Cpne4Q8BLR2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cpne4Q8BLR2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cpne4Q8BLR2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpne4Q8BLR2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.97■■□□□ 1.11
Cpne4Q8BLR2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpne4Q8BLR2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cpne4Q8BLR2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cpne4Q8BLR2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cpne4Q8BLR2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Cpne4Q8BLR2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cpne4Q8BLR2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.92■■□□□ 1.1
Cpne4Q8BLR2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cpne4Q8BLR2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpne4Q8BLR2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cpne4Q8BLR2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpne4Q8BLR2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.9■■□□□ 1.1
Cpne4Q8BLR2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.9■■□□□ 1.1
Cpne4Q8BLR2 Zxda-201ENSMUST00000117281 2621 ntBASIC21.9■■□□□ 1.1
Cpne4Q8BLR2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpne4Q8BLR2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cpne4Q8BLR2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cpne4Q8BLR2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpne4Q8BLR2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpne4Q8BLR2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.88■■□□□ 1.09
Cpne4Q8BLR2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cpne4Q8BLR2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.88■■□□□ 1.09
Cpne4Q8BLR2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Cpne4Q8BLR2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cpne4Q8BLR2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpne4Q8BLR2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Cpne4Q8BLR2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpne4Q8BLR2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cpne4Q8BLR2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cpne4Q8BLR2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.81■■□□□ 1.08
Cpne4Q8BLR2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.8■■□□□ 1.08
Cpne4Q8BLR2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cpne4Q8BLR2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.79■■□□□ 1.08
Cpne4Q8BLR2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cpne4Q8BLR2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.78■■□□□ 1.08
Cpne4Q8BLR2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.77■■□□□ 1.08
Cpne4Q8BLR2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cpne4Q8BLR2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cpne4Q8BLR2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cpne4Q8BLR2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cpne4Q8BLR2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.76■■□□□ 1.07
Cpne4Q8BLR2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cpne4Q8BLR2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cpne4Q8BLR2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms