Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cdhr3Q8BL00 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdhr3Q8BL00 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdhr3Q8BL00 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdhr3Q8BL00 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdhr3Q8BL00 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdhr3Q8BL00 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cdhr3Q8BL00 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cdhr3Q8BL00 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.61■■□□□ 1.05
Cdhr3Q8BL00 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdhr3Q8BL00 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.59■■□□□ 1.05
Cdhr3Q8BL00 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cdhr3Q8BL00 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cdhr3Q8BL00 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.58■■□□□ 1.04
Cdhr3Q8BL00 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdhr3Q8BL00 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr3Q8BL00 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr3Q8BL00 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr3Q8BL00 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdhr3Q8BL00 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.56■■□□□ 1.04
Cdhr3Q8BL00 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdhr3Q8BL00 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdhr3Q8BL00 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cdhr3Q8BL00 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cdhr3Q8BL00 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cdhr3Q8BL00 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdhr3Q8BL00 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Cdhr3Q8BL00 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdhr3Q8BL00 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.49■■□□□ 1.03
Cdhr3Q8BL00 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdhr3Q8BL00 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdhr3Q8BL00 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
Cdhr3Q8BL00 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdhr3Q8BL00 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdhr3Q8BL00 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdhr3Q8BL00 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdhr3Q8BL00 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Cdhr3Q8BL00 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdhr3Q8BL00 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cdhr3Q8BL00 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdhr3Q8BL00 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Cdhr3Q8BL00 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cdhr3Q8BL00 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Cdhr3Q8BL00 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdhr3Q8BL00 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cdhr3Q8BL00 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr3Q8BL00 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr3Q8BL00 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr3Q8BL00 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr3Q8BL00 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdhr3Q8BL00 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdhr3Q8BL00 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.39■■□□□ 1.01
Cdhr3Q8BL00 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdhr3Q8BL00 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdhr3Q8BL00 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdhr3Q8BL00 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Cdhr3Q8BL00 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdhr3Q8BL00 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.37■■□□□ 1.01
Cdhr3Q8BL00 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdhr3Q8BL00 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdhr3Q8BL00 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cdhr3Q8BL00 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cdhr3Q8BL00 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdhr3Q8BL00 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdhr3Q8BL00 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Cdhr3Q8BL00 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdhr3Q8BL00 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdhr3Q8BL00 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdhr3Q8BL00 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdhr3Q8BL00 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdhr3Q8BL00 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cdhr3Q8BL00 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdhr3Q8BL00 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdhr3Q8BL00 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cdhr3Q8BL00 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cdhr3Q8BL00 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdhr3Q8BL00 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cdhr3Q8BL00 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdhr3Q8BL00 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cdhr3Q8BL00 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.27■■□□□ 1
Cdhr3Q8BL00 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cdhr3Q8BL00 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdhr3Q8BL00 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdhr3Q8BL00 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdhr3Q8BL00 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdhr3Q8BL00 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Cdhr3Q8BL00 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdhr3Q8BL00 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdhr3Q8BL00 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdhr3Q8BL00 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdhr3Q8BL00 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Cdhr3Q8BL00 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdhr3Q8BL00 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.23■□□□□ 0.99
Cdhr3Q8BL00 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdhr3Q8BL00 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdhr3Q8BL00 Gm24804-201ENSMUST00000174982 85 ntBASIC21.22■□□□□ 0.99
Cdhr3Q8BL00 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdhr3Q8BL00 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdhr3Q8BL00 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdhr3Q8BL00 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms