Protein–RNA interactions for Protein: Q8BIF2

Rbfox3, RNA binding protein fox-1 homolog 3, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox3Q8BIF2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbfox3Q8BIF2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Rbfox3Q8BIF2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbfox3Q8BIF2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbfox3Q8BIF2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbfox3Q8BIF2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rbfox3Q8BIF2 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.75■□□□□ 0.59
Rbfox3Q8BIF2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rbfox3Q8BIF2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Rbfox3Q8BIF2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rbfox3Q8BIF2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rbfox3Q8BIF2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rbfox3Q8BIF2 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.73■□□□□ 0.59
Rbfox3Q8BIF2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rbfox3Q8BIF2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rbfox3Q8BIF2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.72■□□□□ 0.59
Rbfox3Q8BIF2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.72■□□□□ 0.59
Rbfox3Q8BIF2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rbfox3Q8BIF2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rbfox3Q8BIF2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rbfox3Q8BIF2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbfox3Q8BIF2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbfox3Q8BIF2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rbfox3Q8BIF2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox3Q8BIF2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.69■□□□□ 0.58
Rbfox3Q8BIF2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox3Q8BIF2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox3Q8BIF2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbfox3Q8BIF2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rbfox3Q8BIF2 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.68■□□□□ 0.58
Rbfox3Q8BIF2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbfox3Q8BIF2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rbfox3Q8BIF2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbfox3Q8BIF2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbfox3Q8BIF2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rbfox3Q8BIF2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbfox3Q8BIF2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbfox3Q8BIF2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbfox3Q8BIF2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbfox3Q8BIF2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rbfox3Q8BIF2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.64■□□□□ 0.57
Rbfox3Q8BIF2 Amer2-203ENSMUST00000225247 2662 ntBASIC18.63■□□□□ 0.57
Rbfox3Q8BIF2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbfox3Q8BIF2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbfox3Q8BIF2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbfox3Q8BIF2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.62■□□□□ 0.57
Rbfox3Q8BIF2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbfox3Q8BIF2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbfox3Q8BIF2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rbfox3Q8BIF2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbfox3Q8BIF2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbfox3Q8BIF2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rbfox3Q8BIF2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rbfox3Q8BIF2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbfox3Q8BIF2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbfox3Q8BIF2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rbfox3Q8BIF2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbfox3Q8BIF2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbfox3Q8BIF2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbfox3Q8BIF2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rbfox3Q8BIF2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rbfox3Q8BIF2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rbfox3Q8BIF2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbfox3Q8BIF2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbfox3Q8BIF2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Rbfox3Q8BIF2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rbfox3Q8BIF2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbfox3Q8BIF2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbfox3Q8BIF2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbfox3Q8BIF2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.57■□□□□ 0.56
Rbfox3Q8BIF2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbfox3Q8BIF2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbfox3Q8BIF2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbfox3Q8BIF2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.55■□□□□ 0.56
Rbfox3Q8BIF2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Rbfox3Q8BIF2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbfox3Q8BIF2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.55■□□□□ 0.56
Rbfox3Q8BIF2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rbfox3Q8BIF2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rbfox3Q8BIF2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rbfox3Q8BIF2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rbfox3Q8BIF2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rbfox3Q8BIF2 Gm45855-201ENSMUST00000212546 880 ntBASIC18.51■□□□□ 0.55
Rbfox3Q8BIF2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rbfox3Q8BIF2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbfox3Q8BIF2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbfox3Q8BIF2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbfox3Q8BIF2 Gm9397-201ENSMUST00000200125 605 ntBASIC18.5■□□□□ 0.55
Rbfox3Q8BIF2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbfox3Q8BIF2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.5■□□□□ 0.55
Rbfox3Q8BIF2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Rbfox3Q8BIF2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Rbfox3Q8BIF2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rbfox3Q8BIF2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rbfox3Q8BIF2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rbfox3Q8BIF2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rbfox3Q8BIF2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.48■□□□□ 0.55
Rbfox3Q8BIF2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rbfox3Q8BIF2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rbfox3Q8BIF2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms