Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SynbQ8BI41 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SynbQ8BI41 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SynbQ8BI41 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SynbQ8BI41 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SynbQ8BI41 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SynbQ8BI41 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SynbQ8BI41 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SynbQ8BI41 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SynbQ8BI41 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SynbQ8BI41 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SynbQ8BI41 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SynbQ8BI41 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.31■■□□□ 1.32
SynbQ8BI41 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SynbQ8BI41 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SynbQ8BI41 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SynbQ8BI41 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SynbQ8BI41 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.29■■□□□ 1.32
SynbQ8BI41 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.29■■□□□ 1.32
SynbQ8BI41 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SynbQ8BI41 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SynbQ8BI41 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SynbQ8BI41 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SynbQ8BI41 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SynbQ8BI41 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SynbQ8BI41 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SynbQ8BI41 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.25■■□□□ 1.31
SynbQ8BI41 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SynbQ8BI41 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.24■■□□□ 1.31
SynbQ8BI41 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SynbQ8BI41 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.24■■□□□ 1.31
SynbQ8BI41 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SynbQ8BI41 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SynbQ8BI41 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SynbQ8BI41 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.22■■□□□ 1.31
SynbQ8BI41 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SynbQ8BI41 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SynbQ8BI41 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.2■■□□□ 1.3
SynbQ8BI41 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SynbQ8BI41 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SynbQ8BI41 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SynbQ8BI41 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SynbQ8BI41 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SynbQ8BI41 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SynbQ8BI41 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SynbQ8BI41 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SynbQ8BI41 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SynbQ8BI41 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
SynbQ8BI41 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.16■■□□□ 1.3
SynbQ8BI41 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SynbQ8BI41 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SynbQ8BI41 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SynbQ8BI41 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SynbQ8BI41 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.13■■□□□ 1.29
SynbQ8BI41 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.13■■□□□ 1.29
SynbQ8BI41 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SynbQ8BI41 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SynbQ8BI41 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.13■■□□□ 1.29
SynbQ8BI41 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SynbQ8BI41 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SynbQ8BI41 Nkain2-201ENSMUST00000092602 558 ntBASIC23.11■■□□□ 1.29
SynbQ8BI41 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SynbQ8BI41 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.11■■□□□ 1.29
SynbQ8BI41 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SynbQ8BI41 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
SynbQ8BI41 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.09■■□□□ 1.29
SynbQ8BI41 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SynbQ8BI41 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.08■■□□□ 1.29
SynbQ8BI41 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SynbQ8BI41 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SynbQ8BI41 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.06■■□□□ 1.28
SynbQ8BI41 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.06■■□□□ 1.28
SynbQ8BI41 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.06■■□□□ 1.28
SynbQ8BI41 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SynbQ8BI41 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SynbQ8BI41 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SynbQ8BI41 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SynbQ8BI41 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SynbQ8BI41 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SynbQ8BI41 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SynbQ8BI41 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SynbQ8BI41 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SynbQ8BI41 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SynbQ8BI41 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SynbQ8BI41 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SynbQ8BI41 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SynbQ8BI41 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
SynbQ8BI41 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
SynbQ8BI41 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SynbQ8BI41 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SynbQ8BI41 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SynbQ8BI41 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23■■□□□ 1.27
SynbQ8BI41 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
SynbQ8BI41 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SynbQ8BI41 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
SynbQ8BI41 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SynbQ8BI41 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SynbQ8BI41 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SynbQ8BI41 Gm7432-201ENSMUST00000210343 879 ntBASIC22.99■■□□□ 1.27
SynbQ8BI41 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms