Protein–RNA interactions for Protein: Q6P6N5

Spred3, Sprouty-related, EVH1 domain-containing protein 3, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spred3Q6P6N5 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.47■■□□□ 1.03
Spred3Q6P6N5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Spred3Q6P6N5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Spred3Q6P6N5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Spred3Q6P6N5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Spred3Q6P6N5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.45■■□□□ 1.02
Spred3Q6P6N5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Spred3Q6P6N5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Spred3Q6P6N5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Spred3Q6P6N5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Spred3Q6P6N5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Spred3Q6P6N5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Spred3Q6P6N5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Spred3Q6P6N5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Spred3Q6P6N5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Spred3Q6P6N5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Spred3Q6P6N5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.4■■□□□ 1.02
Spred3Q6P6N5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Spred3Q6P6N5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.4■■□□□ 1.02
Spred3Q6P6N5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Spred3Q6P6N5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Spred3Q6P6N5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Spred3Q6P6N5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Spred3Q6P6N5 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.38■■□□□ 1.01
Spred3Q6P6N5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Spred3Q6P6N5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Spred3Q6P6N5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Spred3Q6P6N5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Spred3Q6P6N5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.36■■□□□ 1.01
Spred3Q6P6N5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Spred3Q6P6N5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Spred3Q6P6N5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Spred3Q6P6N5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Spred3Q6P6N5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Spred3Q6P6N5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Spred3Q6P6N5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Spred3Q6P6N5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Spred3Q6P6N5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Spred3Q6P6N5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.33■■□□□ 1.01
Spred3Q6P6N5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.33■■□□□ 1.01
Spred3Q6P6N5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.33■■□□□ 1
Spred3Q6P6N5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Spred3Q6P6N5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.32■■□□□ 1
Spred3Q6P6N5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Spred3Q6P6N5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.31■■□□□ 1
Spred3Q6P6N5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.31■■□□□ 1
Spred3Q6P6N5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Spred3Q6P6N5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Spred3Q6P6N5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Spred3Q6P6N5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.27■■□□□ 1
Spred3Q6P6N5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Spred3Q6P6N5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Spred3Q6P6N5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.27■□□□□ 0.99
Spred3Q6P6N5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.25■□□□□ 0.99
Spred3Q6P6N5 Zxda-201ENSMUST00000117281 2621 ntBASIC21.25■□□□□ 0.99
Spred3Q6P6N5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Spred3Q6P6N5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Spred3Q6P6N5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Spred3Q6P6N5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Spred3Q6P6N5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Spred3Q6P6N5 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.2■□□□□ 0.98
Spred3Q6P6N5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Spred3Q6P6N5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Spred3Q6P6N5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spred3Q6P6N5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Spred3Q6P6N5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.18■□□□□ 0.98
Spred3Q6P6N5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Spred3Q6P6N5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Spred3Q6P6N5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Spred3Q6P6N5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Spred3Q6P6N5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Spred3Q6P6N5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Spred3Q6P6N5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.17■□□□□ 0.98
Spred3Q6P6N5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Spred3Q6P6N5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.14■□□□□ 0.97
Spred3Q6P6N5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.13■□□□□ 0.97
Spred3Q6P6N5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.13■□□□□ 0.97
Spred3Q6P6N5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Spred3Q6P6N5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.12■□□□□ 0.97
Spred3Q6P6N5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Spred3Q6P6N5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Spred3Q6P6N5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.1■□□□□ 0.97
Spred3Q6P6N5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Spred3Q6P6N5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Spred3Q6P6N5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.09■□□□□ 0.97
Spred3Q6P6N5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Spred3Q6P6N5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Spred3Q6P6N5 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.08■□□□□ 0.97
Spred3Q6P6N5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.08■□□□□ 0.97
Spred3Q6P6N5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Spred3Q6P6N5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Spred3Q6P6N5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Spred3Q6P6N5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Spred3Q6P6N5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Spred3Q6P6N5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Spred3Q6P6N5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Spred3Q6P6N5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Spred3Q6P6N5 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.05■□□□□ 0.96
Spred3Q6P6N5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Spred3Q6P6N5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms