Protein–RNA interactions for Protein: Q6P2K6

Ppp4r3a, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r3aQ6P2K6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30,64■■■□□ 2,5
Ppp4r3aQ6P2K6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30,63■■■□□ 2,49
Ppp4r3aQ6P2K6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30,63■■■□□ 2,49
Ppp4r3aQ6P2K6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30,63■■■□□ 2,49
Ppp4r3aQ6P2K6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Ppp4r3aQ6P2K6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30,62■■■□□ 2,49
Ppp4r3aQ6P2K6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30,62■■■□□ 2,49
Ppp4r3aQ6P2K6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Ppp4r3aQ6P2K6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30,6■■■□□ 2,49
Ppp4r3aQ6P2K6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30,6■■■□□ 2,49
Ppp4r3aQ6P2K6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Ppp4r3aQ6P2K6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Ppp4r3aQ6P2K6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Ppp4r3aQ6P2K6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30,56■■■□□ 2,48
Ppp4r3aQ6P2K6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30,55■■■□□ 2,48
Ppp4r3aQ6P2K6 AC157572.2-201ENSMUST00000226970 908 ntBASIC30,54■■■□□ 2,48
Ppp4r3aQ6P2K6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Ppp4r3aQ6P2K6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30,52■■■□□ 2,48
Ppp4r3aQ6P2K6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30,52■■■□□ 2,48
Ppp4r3aQ6P2K6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30,51■■■□□ 2,47
Ppp4r3aQ6P2K6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30,5■■■□□ 2,47
Ppp4r3aQ6P2K6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Ppp4r3aQ6P2K6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30,5■■■□□ 2,47
Ppp4r3aQ6P2K6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Ppp4r3aQ6P2K6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30,49■■■□□ 2,47
Ppp4r3aQ6P2K6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Ppp4r3aQ6P2K6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30,48■■■□□ 2,47
Ppp4r3aQ6P2K6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Ppp4r3aQ6P2K6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30,47■■■□□ 2,47
Ppp4r3aQ6P2K6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30,46■■■□□ 2,47
Ppp4r3aQ6P2K6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30,46■■■□□ 2,47
Ppp4r3aQ6P2K6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Ppp4r3aQ6P2K6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Ppp4r3aQ6P2K6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Ppp4r3aQ6P2K6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Ppp4r3aQ6P2K6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30,44■■■□□ 2,46
Ppp4r3aQ6P2K6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30,44■■■□□ 2,46
Ppp4r3aQ6P2K6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30,43■■■□□ 2,46
Ppp4r3aQ6P2K6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30,42■■■□□ 2,46
Ppp4r3aQ6P2K6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30,41■■■□□ 2,46
Ppp4r3aQ6P2K6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30,41■■■□□ 2,46
Ppp4r3aQ6P2K6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
Ppp4r3aQ6P2K6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30,39■■■□□ 2,46
Ppp4r3aQ6P2K6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30,36■■■□□ 2,45
Ppp4r3aQ6P2K6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30,36■■■□□ 2,45
Ppp4r3aQ6P2K6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30,35■■■□□ 2,45
Ppp4r3aQ6P2K6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30,34■■■□□ 2,45
Ppp4r3aQ6P2K6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Ppp4r3aQ6P2K6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30,33■■■□□ 2,45
Ppp4r3aQ6P2K6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30,33■■■□□ 2,45
Ppp4r3aQ6P2K6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30,32■■■□□ 2,44
Ppp4r3aQ6P2K6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30,32■■■□□ 2,44
Ppp4r3aQ6P2K6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30,31■■■□□ 2,44
Ppp4r3aQ6P2K6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30,31■■■□□ 2,44
Ppp4r3aQ6P2K6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30,3■■■□□ 2,44
Ppp4r3aQ6P2K6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30,28■■■□□ 2,44
Ppp4r3aQ6P2K6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30,28■■■□□ 2,44
Ppp4r3aQ6P2K6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30,27■■■□□ 2,44
Ppp4r3aQ6P2K6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30,26■■■□□ 2,44
Ppp4r3aQ6P2K6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30,26■■■□□ 2,43
Ppp4r3aQ6P2K6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30,25■■■□□ 2,43
Ppp4r3aQ6P2K6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Ppp4r3aQ6P2K6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Ppp4r3aQ6P2K6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30,23■■■□□ 2,43
Ppp4r3aQ6P2K6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30,22■■■□□ 2,43
Ppp4r3aQ6P2K6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30,19■■■□□ 2,42
Ppp4r3aQ6P2K6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Ppp4r3aQ6P2K6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Ppp4r3aQ6P2K6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30,16■■■□□ 2,42
Ppp4r3aQ6P2K6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30,15■■■□□ 2,42
Ppp4r3aQ6P2K6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30,15■■■□□ 2,42
Ppp4r3aQ6P2K6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30,15■■■□□ 2,42
Ppp4r3aQ6P2K6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30,15■■■□□ 2,42
Ppp4r3aQ6P2K6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30,15■■■□□ 2,42
Ppp4r3aQ6P2K6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30,14■■■□□ 2,42
Ppp4r3aQ6P2K6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30,14■■■□□ 2,42
Ppp4r3aQ6P2K6 Zxda-201ENSMUST00000117281 2621 ntBASIC30,13■■■□□ 2,41
Ppp4r3aQ6P2K6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30,13■■■□□ 2,41
Ppp4r3aQ6P2K6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Ppp4r3aQ6P2K6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Ppp4r3aQ6P2K6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30,1■■■□□ 2,41
Ppp4r3aQ6P2K6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30,09■■■□□ 2,41
Ppp4r3aQ6P2K6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30,08■■■□□ 2,41
Ppp4r3aQ6P2K6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30,08■■■□□ 2,41
Ppp4r3aQ6P2K6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30,07■■■□□ 2,4
Ppp4r3aQ6P2K6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30,06■■■□□ 2,4
Ppp4r3aQ6P2K6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30,06■■■□□ 2,4
Ppp4r3aQ6P2K6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30,05■■■□□ 2,4
Ppp4r3aQ6P2K6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30,05■■■□□ 2,4
Ppp4r3aQ6P2K6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Ppp4r3aQ6P2K6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Ppp4r3aQ6P2K6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,04■■■□□ 2,4
Ppp4r3aQ6P2K6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Ppp4r3aQ6P2K6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Ppp4r3aQ6P2K6 Gm9939-201ENSMUST00000067161 1154 ntBASIC29,99■■■□□ 2,39
Ppp4r3aQ6P2K6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Ppp4r3aQ6P2K6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29,97■■■□□ 2,39
Ppp4r3aQ6P2K6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29,96■■■□□ 2,39
Ppp4r3aQ6P2K6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29,96■■■□□ 2,39
Ppp4r3aQ6P2K6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29,95■■■□□ 2,39
Retrieved 100 of 76,532 protein–RNA pairs in 12,3 ms