Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ss18Q62280 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Ss18Q62280 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ss18Q62280 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ss18Q62280 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ss18Q62280 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ss18Q62280 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ss18Q62280 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.01■□□□□ 0.47
Ss18Q62280 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ss18Q62280 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ss18Q62280 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ss18Q62280 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ss18Q62280 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ss18Q62280 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ss18Q62280 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ss18Q62280 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ss18Q62280 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ss18Q62280 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Ss18Q62280 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ss18Q62280 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Ss18Q62280 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ss18Q62280 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ss18Q62280 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ss18Q62280 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ss18Q62280 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ss18Q62280 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Ss18Q62280 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ss18Q62280 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ss18Q62280 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ss18Q62280 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ss18Q62280 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ss18Q62280 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.95■□□□□ 0.46
Ss18Q62280 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ss18Q62280 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ss18Q62280 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ss18Q62280 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ss18Q62280 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.94■□□□□ 0.46
Ss18Q62280 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ss18Q62280 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.93■□□□□ 0.46
Ss18Q62280 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ss18Q62280 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ss18Q62280 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ss18Q62280 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ss18Q62280 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Ss18Q62280 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ss18Q62280 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ss18Q62280 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ss18Q62280 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ss18Q62280 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.9■□□□□ 0.46
Ss18Q62280 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ss18Q62280 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ss18Q62280 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.89■□□□□ 0.45
Ss18Q62280 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ss18Q62280 Gm24804-201ENSMUST00000174982 85 ntBASIC17.88■□□□□ 0.45
Ss18Q62280 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ss18Q62280 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ss18Q62280 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ss18Q62280 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ss18Q62280 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ss18Q62280 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ss18Q62280 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ss18Q62280 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ss18Q62280 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ss18Q62280 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ss18Q62280 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ss18Q62280 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ss18Q62280 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ss18Q62280 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ss18Q62280 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ss18Q62280 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ss18Q62280 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ss18Q62280 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Ss18Q62280 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ss18Q62280 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ss18Q62280 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ss18Q62280 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ss18Q62280 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ss18Q62280 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Ss18Q62280 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ss18Q62280 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ss18Q62280 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ss18Q62280 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ss18Q62280 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ss18Q62280 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.82■□□□□ 0.44
Ss18Q62280 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.82■□□□□ 0.44
Ss18Q62280 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ss18Q62280 Gm16148-201ENSMUST00000119653 893 ntBASIC17.8■□□□□ 0.44
Ss18Q62280 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ss18Q62280 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ss18Q62280 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ss18Q62280 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ss18Q62280 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ss18Q62280 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ss18Q62280 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ss18Q62280 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.78■□□□□ 0.44
Ss18Q62280 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ss18Q62280 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ss18Q62280 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.75■□□□□ 0.43
Ss18Q62280 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ss18Q62280 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms