Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Traf4Q61382 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Traf4Q61382 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Traf4Q61382 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Traf4Q61382 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
Traf4Q61382 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Traf4Q61382 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Traf4Q61382 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Traf4Q61382 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Traf4Q61382 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
Traf4Q61382 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Traf4Q61382 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Traf4Q61382 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Traf4Q61382 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Traf4Q61382 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Traf4Q61382 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Traf4Q61382 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Traf4Q61382 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Traf4Q61382 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Traf4Q61382 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.53■■□□□ 1.04
Traf4Q61382 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Traf4Q61382 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Traf4Q61382 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Traf4Q61382 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.5■■□□□ 1.03
Traf4Q61382 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Traf4Q61382 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Traf4Q61382 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Traf4Q61382 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Traf4Q61382 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Traf4Q61382 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Traf4Q61382 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Traf4Q61382 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.47■■□□□ 1.03
Traf4Q61382 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Traf4Q61382 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Traf4Q61382 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.47■■□□□ 1.03
Traf4Q61382 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Traf4Q61382 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.46■■□□□ 1.03
Traf4Q61382 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Traf4Q61382 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Traf4Q61382 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Traf4Q61382 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.45■■□□□ 1.02
Traf4Q61382 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Traf4Q61382 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Traf4Q61382 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Traf4Q61382 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Traf4Q61382 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Traf4Q61382 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Traf4Q61382 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Traf4Q61382 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.43■■□□□ 1.02
Traf4Q61382 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Traf4Q61382 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Traf4Q61382 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Traf4Q61382 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Traf4Q61382 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Traf4Q61382 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Traf4Q61382 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Traf4Q61382 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Traf4Q61382 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Traf4Q61382 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Traf4Q61382 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Traf4Q61382 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Traf4Q61382 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Traf4Q61382 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.35■■□□□ 1.01
Traf4Q61382 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Traf4Q61382 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Traf4Q61382 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Traf4Q61382 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Traf4Q61382 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.33■■□□□ 1
Traf4Q61382 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Traf4Q61382 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Traf4Q61382 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Traf4Q61382 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Traf4Q61382 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Traf4Q61382 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Traf4Q61382 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.31■■□□□ 1
Traf4Q61382 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Traf4Q61382 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Traf4Q61382 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.3■■□□□ 1
Traf4Q61382 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Traf4Q61382 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Traf4Q61382 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Traf4Q61382 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Traf4Q61382 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.28■■□□□ 1
Traf4Q61382 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Traf4Q61382 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.27■■□□□ 1
Traf4Q61382 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.27■■□□□ 1
Traf4Q61382 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.27■■□□□ 1
Traf4Q61382 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Traf4Q61382 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Traf4Q61382 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.25■□□□□ 0.99
Traf4Q61382 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Traf4Q61382 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Traf4Q61382 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Traf4Q61382 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Traf4Q61382 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.24■□□□□ 0.99
Traf4Q61382 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Traf4Q61382 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Traf4Q61382 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Traf4Q61382 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Traf4Q61382 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms