Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ripk1Q60855 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ripk1Q60855 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ripk1Q60855 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ripk1Q60855 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ripk1Q60855 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ripk1Q60855 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.24■■□□□ 1.31
Ripk1Q60855 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ripk1Q60855 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ripk1Q60855 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ripk1Q60855 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Ripk1Q60855 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.2■■□□□ 1.3
Ripk1Q60855 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ripk1Q60855 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ripk1Q60855 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ripk1Q60855 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ripk1Q60855 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ripk1Q60855 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ripk1Q60855 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.16■■□□□ 1.3
Ripk1Q60855 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ripk1Q60855 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ripk1Q60855 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ripk1Q60855 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.15■■□□□ 1.3
Ripk1Q60855 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Ripk1Q60855 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ripk1Q60855 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Ripk1Q60855 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ripk1Q60855 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ripk1Q60855 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ripk1Q60855 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ripk1Q60855 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ripk1Q60855 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ripk1Q60855 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.11■■□□□ 1.29
Ripk1Q60855 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ripk1Q60855 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ripk1Q60855 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ripk1Q60855 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ripk1Q60855 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ripk1Q60855 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.09■■□□□ 1.29
Ripk1Q60855 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.09■■□□□ 1.29
Ripk1Q60855 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ripk1Q60855 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
Ripk1Q60855 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ripk1Q60855 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.07■■□□□ 1.28
Ripk1Q60855 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.07■■□□□ 1.28
Ripk1Q60855 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ripk1Q60855 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ripk1Q60855 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ripk1Q60855 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ripk1Q60855 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
Ripk1Q60855 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ripk1Q60855 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ripk1Q60855 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ripk1Q60855 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ripk1Q60855 Zfp131-205ENSMUST00000223812 663 ntBASIC23.04■■□□□ 1.28
Ripk1Q60855 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ripk1Q60855 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Ripk1Q60855 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ripk1Q60855 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.01■■□□□ 1.27
Ripk1Q60855 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23■■□□□ 1.27
Ripk1Q60855 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23■■□□□ 1.27
Ripk1Q60855 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ripk1Q60855 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ripk1Q60855 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ripk1Q60855 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ripk1Q60855 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ripk1Q60855 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ripk1Q60855 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ripk1Q60855 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.94■■□□□ 1.26
Ripk1Q60855 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ripk1Q60855 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ripk1Q60855 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ripk1Q60855 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.93■■□□□ 1.26
Ripk1Q60855 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ripk1Q60855 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ripk1Q60855 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ripk1Q60855 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ripk1Q60855 Amer2-203ENSMUST00000225247 2662 ntBASIC22.91■■□□□ 1.26
Ripk1Q60855 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ripk1Q60855 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ripk1Q60855 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ripk1Q60855 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.9■■□□□ 1.26
Ripk1Q60855 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Ripk1Q60855 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ripk1Q60855 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ripk1Q60855 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ripk1Q60855 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
Ripk1Q60855 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.86■■□□□ 1.25
Ripk1Q60855 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Ripk1Q60855 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ripk1Q60855 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.85■■□□□ 1.25
Ripk1Q60855 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Ripk1Q60855 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.85■■□□□ 1.25
Ripk1Q60855 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ripk1Q60855 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
Ripk1Q60855 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ripk1Q60855 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Ripk1Q60855 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ripk1Q60855 Gm9397-201ENSMUST00000200125 605 ntBASIC22.83■■□□□ 1.25
Ripk1Q60855 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms