Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav7-2Q5R1I3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7-2Q5R1I3 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.06■□□□□ 0.48
Trav7-2Q5R1I3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trav7-2Q5R1I3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7-2Q5R1I3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7-2Q5R1I3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Trav7-2Q5R1I3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7-2Q5R1I3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7-2Q5R1I3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trav7-2Q5R1I3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-2Q5R1I3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-2Q5R1I3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-2Q5R1I3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-2Q5R1I3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav7-2Q5R1I3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trav7-2Q5R1I3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7-2Q5R1I3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trav7-2Q5R1I3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7-2Q5R1I3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7-2Q5R1I3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trav7-2Q5R1I3 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.02■□□□□ 0.47
Trav7-2Q5R1I3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-2Q5R1I3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-2Q5R1I3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-2Q5R1I3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18■□□□□ 0.47
Trav7-2Q5R1I3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7-2Q5R1I3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav7-2Q5R1I3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7-2Q5R1I3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.99■□□□□ 0.47
Trav7-2Q5R1I3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-2Q5R1I3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-2Q5R1I3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-2Q5R1I3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-2Q5R1I3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-2Q5R1I3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-2Q5R1I3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7-2Q5R1I3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav7-2Q5R1I3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7-2Q5R1I3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7-2Q5R1I3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7-2Q5R1I3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7-2Q5R1I3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-2Q5R1I3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav7-2Q5R1I3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7-2Q5R1I3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7-2Q5R1I3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7-2Q5R1I3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-2Q5R1I3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Trav7-2Q5R1I3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7-2Q5R1I3 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.92■□□□□ 0.46
Trav7-2Q5R1I3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7-2Q5R1I3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7-2Q5R1I3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav7-2Q5R1I3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7-2Q5R1I3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav7-2Q5R1I3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7-2Q5R1I3 Zfp131-205ENSMUST00000223812 663 ntBASIC17.91■□□□□ 0.46
Trav7-2Q5R1I3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav7-2Q5R1I3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7-2Q5R1I3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7-2Q5R1I3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7-2Q5R1I3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7-2Q5R1I3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav7-2Q5R1I3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Trav7-2Q5R1I3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7-2Q5R1I3 Amer2-203ENSMUST00000225247 2662 ntBASIC17.89■□□□□ 0.45
Trav7-2Q5R1I3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav7-2Q5R1I3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7-2Q5R1I3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7-2Q5R1I3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7-2Q5R1I3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav7-2Q5R1I3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7-2Q5R1I3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7-2Q5R1I3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav7-2Q5R1I3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-2Q5R1I3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-2Q5R1I3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-2Q5R1I3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-2Q5R1I3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trav7-2Q5R1I3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-2Q5R1I3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-2Q5R1I3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.84■□□□□ 0.45
Trav7-2Q5R1I3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-2Q5R1I3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-2Q5R1I3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trav7-2Q5R1I3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trav7-2Q5R1I3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav7-2Q5R1I3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav7-2Q5R1I3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav7-2Q5R1I3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7-2Q5R1I3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7-2Q5R1I3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7-2Q5R1I3 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.82■□□□□ 0.44
Trav7-2Q5R1I3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-2Q5R1I3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-2Q5R1I3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-2Q5R1I3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.81■□□□□ 0.44
Trav7-2Q5R1I3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-2Q5R1I3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms