Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tmem40Q4FJU9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tmem40Q4FJU9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tmem40Q4FJU9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tmem40Q4FJU9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tmem40Q4FJU9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tmem40Q4FJU9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tmem40Q4FJU9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Tmem40Q4FJU9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tmem40Q4FJU9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tmem40Q4FJU9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.08■□□□□ 0.97
Tmem40Q4FJU9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tmem40Q4FJU9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Tmem40Q4FJU9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tmem40Q4FJU9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
Tmem40Q4FJU9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Tmem40Q4FJU9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tmem40Q4FJU9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tmem40Q4FJU9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tmem40Q4FJU9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Tmem40Q4FJU9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tmem40Q4FJU9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tmem40Q4FJU9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tmem40Q4FJU9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tmem40Q4FJU9 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.02■□□□□ 0.96
Tmem40Q4FJU9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
Tmem40Q4FJU9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tmem40Q4FJU9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tmem40Q4FJU9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Tmem40Q4FJU9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tmem40Q4FJU9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Tmem40Q4FJU9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tmem40Q4FJU9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tmem40Q4FJU9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.98■□□□□ 0.95
Tmem40Q4FJU9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tmem40Q4FJU9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tmem40Q4FJU9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tmem40Q4FJU9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tmem40Q4FJU9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.97■□□□□ 0.95
Tmem40Q4FJU9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.97■□□□□ 0.95
Tmem40Q4FJU9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Tmem40Q4FJU9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.95■□□□□ 0.94
Tmem40Q4FJU9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tmem40Q4FJU9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tmem40Q4FJU9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tmem40Q4FJU9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tmem40Q4FJU9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tmem40Q4FJU9 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.93■□□□□ 0.94
Tmem40Q4FJU9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tmem40Q4FJU9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Tmem40Q4FJU9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tmem40Q4FJU9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tmem40Q4FJU9 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.91■□□□□ 0.94
Tmem40Q4FJU9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tmem40Q4FJU9 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.91■□□□□ 0.94
Tmem40Q4FJU9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Tmem40Q4FJU9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Tmem40Q4FJU9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tmem40Q4FJU9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmem40Q4FJU9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tmem40Q4FJU9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tmem40Q4FJU9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmem40Q4FJU9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tmem40Q4FJU9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmem40Q4FJU9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tmem40Q4FJU9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tmem40Q4FJU9 Zxda-201ENSMUST00000117281 2621 ntBASIC20.89■□□□□ 0.93
Tmem40Q4FJU9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tmem40Q4FJU9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tmem40Q4FJU9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tmem40Q4FJU9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Tmem40Q4FJU9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tmem40Q4FJU9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tmem40Q4FJU9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Tmem40Q4FJU9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tmem40Q4FJU9 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.83■□□□□ 0.93
Tmem40Q4FJU9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.83■□□□□ 0.93
Tmem40Q4FJU9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tmem40Q4FJU9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.83■□□□□ 0.93
Tmem40Q4FJU9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Tmem40Q4FJU9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tmem40Q4FJU9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tmem40Q4FJU9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.83■□□□□ 0.92
Tmem40Q4FJU9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
Tmem40Q4FJU9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tmem40Q4FJU9 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.82■□□□□ 0.92
Tmem40Q4FJU9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.81■□□□□ 0.92
Tmem40Q4FJU9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Tmem40Q4FJU9 Nkain2-201ENSMUST00000092602 558 ntBASIC20.8■□□□□ 0.92
Tmem40Q4FJU9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tmem40Q4FJU9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.79■□□□□ 0.92
Tmem40Q4FJU9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tmem40Q4FJU9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tmem40Q4FJU9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tmem40Q4FJU9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tmem40Q4FJU9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tmem40Q4FJU9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tmem40Q4FJU9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.77■□□□□ 0.92
Tmem40Q4FJU9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Tmem40Q4FJU9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms