Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Naf1Q3UMQ8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Naf1Q3UMQ8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Naf1Q3UMQ8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.45■■□□□ 1.66
Naf1Q3UMQ8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Naf1Q3UMQ8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Naf1Q3UMQ8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Naf1Q3UMQ8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Naf1Q3UMQ8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Naf1Q3UMQ8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Naf1Q3UMQ8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.4■■□□□ 1.66
Naf1Q3UMQ8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Naf1Q3UMQ8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Naf1Q3UMQ8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Naf1Q3UMQ8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Naf1Q3UMQ8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Naf1Q3UMQ8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Naf1Q3UMQ8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Naf1Q3UMQ8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Naf1Q3UMQ8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Naf1Q3UMQ8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
Naf1Q3UMQ8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Naf1Q3UMQ8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Naf1Q3UMQ8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Naf1Q3UMQ8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Naf1Q3UMQ8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Naf1Q3UMQ8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Naf1Q3UMQ8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Naf1Q3UMQ8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Naf1Q3UMQ8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Naf1Q3UMQ8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Naf1Q3UMQ8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Naf1Q3UMQ8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Naf1Q3UMQ8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Naf1Q3UMQ8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Naf1Q3UMQ8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Naf1Q3UMQ8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.3■■□□□ 1.64
Naf1Q3UMQ8 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.3■■□□□ 1.64
Naf1Q3UMQ8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Naf1Q3UMQ8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Naf1Q3UMQ8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.27■■□□□ 1.64
Naf1Q3UMQ8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Naf1Q3UMQ8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Naf1Q3UMQ8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Naf1Q3UMQ8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Naf1Q3UMQ8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Naf1Q3UMQ8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.23■■□□□ 1.63
Naf1Q3UMQ8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Naf1Q3UMQ8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Naf1Q3UMQ8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Naf1Q3UMQ8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Naf1Q3UMQ8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.21■■□□□ 1.63
Naf1Q3UMQ8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.2■■□□□ 1.62
Naf1Q3UMQ8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Naf1Q3UMQ8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.19■■□□□ 1.62
Naf1Q3UMQ8 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.19■■□□□ 1.62
Naf1Q3UMQ8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Naf1Q3UMQ8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Naf1Q3UMQ8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Naf1Q3UMQ8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Naf1Q3UMQ8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Naf1Q3UMQ8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Naf1Q3UMQ8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Naf1Q3UMQ8 Gm8503-201ENSMUST00000118131 455 ntBASIC25.15■■□□□ 1.62
Naf1Q3UMQ8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Naf1Q3UMQ8 Gm6821-201ENSMUST00000107540 542 ntBASIC25.13■■□□□ 1.61
Naf1Q3UMQ8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Naf1Q3UMQ8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Naf1Q3UMQ8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Naf1Q3UMQ8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.11■■□□□ 1.61
Naf1Q3UMQ8 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.11■■□□□ 1.61
Naf1Q3UMQ8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Naf1Q3UMQ8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Naf1Q3UMQ8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Naf1Q3UMQ8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Naf1Q3UMQ8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Naf1Q3UMQ8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.08■■□□□ 1.61
Naf1Q3UMQ8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Naf1Q3UMQ8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Naf1Q3UMQ8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Naf1Q3UMQ8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.05■■□□□ 1.6
Naf1Q3UMQ8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Naf1Q3UMQ8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Naf1Q3UMQ8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Naf1Q3UMQ8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.04■■□□□ 1.6
Naf1Q3UMQ8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Naf1Q3UMQ8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Naf1Q3UMQ8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Naf1Q3UMQ8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Naf1Q3UMQ8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Naf1Q3UMQ8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Naf1Q3UMQ8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Naf1Q3UMQ8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25■■□□□ 1.59
Naf1Q3UMQ8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Naf1Q3UMQ8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Naf1Q3UMQ8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Naf1Q3UMQ8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.99■■□□□ 1.59
Naf1Q3UMQ8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
Naf1Q3UMQ8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Naf1Q3UMQ8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.97■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms