Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25,46■■□□□ 1,67
Naf1Q3UMQ8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Naf1Q3UMQ8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25,45■■□□□ 1,66
Naf1Q3UMQ8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25,45■■□□□ 1,66
Naf1Q3UMQ8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Naf1Q3UMQ8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Naf1Q3UMQ8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Naf1Q3UMQ8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25,43■■□□□ 1,66
Naf1Q3UMQ8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25,42■■□□□ 1,66
Naf1Q3UMQ8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25,42■■□□□ 1,66
Naf1Q3UMQ8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25,4■■□□□ 1,66
Naf1Q3UMQ8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,39■■□□□ 1,66
Naf1Q3UMQ8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25,39■■□□□ 1,66
Naf1Q3UMQ8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25,39■■□□□ 1,66
Naf1Q3UMQ8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25,39■■□□□ 1,66
Naf1Q3UMQ8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Naf1Q3UMQ8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Naf1Q3UMQ8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Naf1Q3UMQ8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Naf1Q3UMQ8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Naf1Q3UMQ8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25,37■■□□□ 1,65
Naf1Q3UMQ8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25,37■■□□□ 1,65
Naf1Q3UMQ8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Naf1Q3UMQ8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Naf1Q3UMQ8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25,36■■□□□ 1,65
Naf1Q3UMQ8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25,35■■□□□ 1,65
Naf1Q3UMQ8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25,35■■□□□ 1,65
Naf1Q3UMQ8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Naf1Q3UMQ8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25,34■■□□□ 1,65
Naf1Q3UMQ8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25,32■■□□□ 1,64
Naf1Q3UMQ8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25,31■■□□□ 1,64
Naf1Q3UMQ8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Naf1Q3UMQ8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25,31■■□□□ 1,64
Naf1Q3UMQ8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Naf1Q3UMQ8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Naf1Q3UMQ8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25,3■■□□□ 1,64
Naf1Q3UMQ8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25,3■■□□□ 1,64
Naf1Q3UMQ8 Gm9939-201ENSMUST00000067161 1154 ntBASIC25,3■■□□□ 1,64
Naf1Q3UMQ8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25,29■■□□□ 1,64
Naf1Q3UMQ8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25,29■■□□□ 1,64
Naf1Q3UMQ8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25,27■■□□□ 1,64
Naf1Q3UMQ8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Naf1Q3UMQ8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25,27■■□□□ 1,64
Naf1Q3UMQ8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25,26■■□□□ 1,63
Naf1Q3UMQ8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25,25■■□□□ 1,63
Naf1Q3UMQ8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Naf1Q3UMQ8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25,23■■□□□ 1,63
Naf1Q3UMQ8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25,23■■□□□ 1,63
Naf1Q3UMQ8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25,22■■□□□ 1,63
Naf1Q3UMQ8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25,22■■□□□ 1,63
Naf1Q3UMQ8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Naf1Q3UMQ8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25,21■■□□□ 1,63
Naf1Q3UMQ8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25,2■■□□□ 1,62
Naf1Q3UMQ8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25,2■■□□□ 1,62
Naf1Q3UMQ8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25,19■■□□□ 1,62
Naf1Q3UMQ8 Gm6345-201ENSMUST00000180378 1691 ntBASIC25,19■■□□□ 1,62
Naf1Q3UMQ8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25,18■■□□□ 1,62
Naf1Q3UMQ8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Naf1Q3UMQ8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Naf1Q3UMQ8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25,18■■□□□ 1,62
Naf1Q3UMQ8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Naf1Q3UMQ8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25,16■■□□□ 1,62
Naf1Q3UMQ8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25,16■■□□□ 1,62
Naf1Q3UMQ8 Gm8503-201ENSMUST00000118131 455 ntBASIC25,15■■□□□ 1,62
Naf1Q3UMQ8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25,14■■□□□ 1,62
Naf1Q3UMQ8 Gm6821-201ENSMUST00000107540 542 ntBASIC25,13■■□□□ 1,61
Naf1Q3UMQ8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25,13■■□□□ 1,61
Naf1Q3UMQ8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25,13■■□□□ 1,61
Naf1Q3UMQ8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25,12■■□□□ 1,61
Naf1Q3UMQ8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25,11■■□□□ 1,61
Naf1Q3UMQ8 Gm42809-201ENSMUST00000198429 1138 ntBASIC25,11■■□□□ 1,61
Naf1Q3UMQ8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25,11■■□□□ 1,61
Naf1Q3UMQ8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25,1■■□□□ 1,61
Naf1Q3UMQ8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25,09■■□□□ 1,61
Naf1Q3UMQ8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25,09■■□□□ 1,61
Naf1Q3UMQ8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,08■■□□□ 1,61
Naf1Q3UMQ8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25,08■■□□□ 1,61
Naf1Q3UMQ8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25,07■■□□□ 1,6
Naf1Q3UMQ8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25,07■■□□□ 1,6
Naf1Q3UMQ8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,06■■□□□ 1,6
Naf1Q3UMQ8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25,05■■□□□ 1,6
Naf1Q3UMQ8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25,05■■□□□ 1,6
Naf1Q3UMQ8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25,04■■□□□ 1,6
Naf1Q3UMQ8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25,04■■□□□ 1,6
Naf1Q3UMQ8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25,04■■□□□ 1,6
Naf1Q3UMQ8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25,04■■□□□ 1,6
Naf1Q3UMQ8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25,04■■□□□ 1,6
Naf1Q3UMQ8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25,03■■□□□ 1,6
Naf1Q3UMQ8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25,02■■□□□ 1,6
Naf1Q3UMQ8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25,01■■□□□ 1,59
Naf1Q3UMQ8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1,59
Naf1Q3UMQ8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1,59
Naf1Q3UMQ8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25■■□□□ 1,59
Naf1Q3UMQ8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24,99■■□□□ 1,59
Naf1Q3UMQ8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,99■■□□□ 1,59
Naf1Q3UMQ8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24,99■■□□□ 1,59
Naf1Q3UMQ8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24,99■■□□□ 1,59
Naf1Q3UMQ8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24,99■■□□□ 1,59
Naf1Q3UMQ8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24,98■■□□□ 1,59
Naf1Q3UMQ8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24,97■■□□□ 1,59
Retrieved 100 of 76,532 protein–RNA pairs in 21,7 ms